| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1902 |
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| Symbol | gnd |
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| ID | 1169667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2002046 |
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| End bp | 2003572 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343790 |
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| Product | 6-phosphogluconate dehydrogenase |
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| Protein accession | NP_717509 |
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| Protein GI | 24373466 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
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| TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAACC ACAGCAATCT TAATGACATT GGCGTGATTG GACTTGGTGT GATGGGTAAA
AACCTCGCGC TAAACATCGC CGACAATCAA TATCGCGTCA GTGTCTTCGA TCTCGATCCT
GTTAAAGTCA ACGGGGTTTT ACAACAAGAA AAACAAGAGC GTGTAGGACA GGAACTACGT
ATAACAGGCT GTGCTAATCT TTCAGAAATG TTAGCCAGCC TCACTAAACC TCGTATTCTG
GTACTCTCTG TCCCCGCAGG TGCGCCTGTG GATGGGGTAT GTGCTGCTTT AATTTCTGCC
GGTATCGAAG CTGACGATAT CGTTATCGAT ACGGGTAATA GTCTTTGGAC AGACACCGTT
GAGCGTGAAC AACATTACCA AGGACAGTTT ATTTTCTTCA GCTCAGCCGT TTCGGGTGGT
GAAGTGGGGG CACGTTTTGG CCCTTCGTTA ATGCCAAGTG GCGATCTTGG CGCTTGGCAA
CATGTGGCAC CGATTTGGAA GGCTATCGCC GCTAAGGTCA ACCCTCAAAC TGGGTTGCCG
ATTGAGCGTT TTGAACCGGG TAATCCAGTA ACAGAAGGCG AGCCTTGCAC CACTTATATT
GGCCCTGCTG GTGCTGGGCA CTATGTGAAG ATGGTGCATA ACGGCATTGA ATATGCCGAT
ATGCAGCTGA TTTGCGAAGC TTATCAATTA TTGCATGATG GCCTTGGCAT GAGTGCCGCT
GAAGTGGGCG AGGTGTTTGA ACGCTGGAAT CAGGGCAGTT TAAACAGTTA TCTCATGGGC
ATTAGTGCAG AGGTATTAAA GCAAGCAGAT CCATTAACAG GCAAACCGTT AGTTGAGATG
ATCCTCGATA AAGCGGGACA GAAGGGTACG GGCCTTTGGA CTGCTGTGAG CAGTCTGCAA
ATTGGTTGTC CGGCTCCCAC CATTGCCGAA GCCGTTTATG CTCGCGCGGT AAGCACCCAA
AAATCCCTAC GTGTTGAGCT TAGTAAAAAG CTCGCTGGCC CTCTATCTCC AGCGATGGAT
GAAAACCAAA AAGCCAACTT AATCGATGCC CTAGAGAGTG CCCTTTATTG CGCTAAAGTC
TGTTGCTACG CCCAAGGTTT CCAACTGATG GCGATGACGG CTCTGGAGCA AAAATGGCAG
CTCGATTTTG CTGAGATCGC GAAAATCTGG CGTGCGGGTT GTATTATTCG TGCCACCTTC
TTGCAATCGA TAACCCAGGC TTATCAAGCT GATGCGAACT TAAGTTGTTT ATTGATGGCC
GATACTTTTG CCAGCACTTT ATCGGAAAAA CAAACCGAGT GGCGCATTGC AGTGGCTGCG
GCGATTATGC AAGGGATCCC AGTGCCTTGT ATTAGTTCGG CGCTCGCTTA TTACGACAGT
TATCGCAGTG AGACCCTGCC TGCCAATTTA CTTCAAGGGC AACGTGACTT TTTTGGCGCG
CATACCTTTG AACGCTTAGA TAAGCCTGCA GGTGAGAAAT ATCATCTAGA TTGGAGCGCA
CAAGAAAGGG TTTTAATTAA ACTCTAA
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| Protein sequence | MQNHSNLNDI GVIGLGVMGK NLALNIADNQ YRVSVFDLDP VKVNGVLQQE KQERVGQELR
ITGCANLSEM LASLTKPRIL VLSVPAGAPV DGVCAALISA GIEADDIVID TGNSLWTDTV
EREQHYQGQF IFFSSAVSGG EVGARFGPSL MPSGDLGAWQ HVAPIWKAIA AKVNPQTGLP
IERFEPGNPV TEGEPCTTYI GPAGAGHYVK MVHNGIEYAD MQLICEAYQL LHDGLGMSAA
EVGEVFERWN QGSLNSYLMG ISAEVLKQAD PLTGKPLVEM ILDKAGQKGT GLWTAVSSLQ
IGCPAPTIAE AVYARAVSTQ KSLRVELSKK LAGPLSPAMD ENQKANLIDA LESALYCAKV
CCYAQGFQLM AMTALEQKWQ LDFAEIAKIW RAGCIIRATF LQSITQAYQA DANLSCLLMA
DTFASTLSEK QTEWRIAVAA AIMQGIPVPC ISSALAYYDS YRSETLPANL LQGQRDFFGA
HTFERLDKPA GEKYHLDWSA QERVLIKL
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