Gene SO_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1818 
Symbol 
ID1169591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1907013 
End bp1907786 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content49% 
IMG OID637343705 
Producthypothetical protein 
Protein accessionNP_717426 
Protein GI24373383 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGTTGT TACTCGAGCC CAGTAACTGG GCCTTATTGG CCGCCATTGG CTTAGTTGCC 
GGTTTTATCG ATGCCGTGGT CGGTGGTGGA GGCTTATTAT CAATCCCTGC ACTACTCACC
CTTGGCATCC CGCCTCATAC CGCCTTAGGT ACCAACAAAT TTGCCGCCAG TTTTGGCTCT
TCAATGGCTG CTTGGACCTT TTATCGTCAA CACTTACTCA AACCCGCCTT TTGGTATATG
GCGTTTGTCG CCACTTTTAT TGGTGCAGTC TTAGGCAGCA TCTTGGTTTA TTTGTTAAAT
GCACAATGGC TTGAAAAAGC CTTACCACTG CTGATTATCG GCATCGCGAT ATACAGTTTG
CTCAGCCCCA ATGCCATCTC AGATACTGAT TGCCAAGCGC CGACACAAAC TCAGCCTAAG
TTGAAACAAA GCCTACAAGG TTTGATACTG GGCGCATACG ATGGTTTTGC TGGCCCCGGC
ATTGGTGCAT TTTGGACAGT CAGTTCGGGG ACGCTCTATA AACTGCCATT GTTACATAGC
TGCGCGCTCG CTAGAGCCAT GACCTTTACC AGTAACCTGA CCGCACTGGC GATTTTTGGC
TATCTAGGAC AAGTACACTG GCAGATAGGC CTGTGGATGG GGCTCTCAAT GATGCTAGGT
TCCTTTGTTG GCGCACGCTG TGCAATAAAA TTTGGCATGC CATTTATACG GCCTTTATTT
ATATTAATCG TCCTGTCAAT TGCCGCTAAT CTGGCGTGGA GCGCATGGTT TTGA
 
Protein sequence
MELLLEPSNW ALLAAIGLVA GFIDAVVGGG GLLSIPALLT LGIPPHTALG TNKFAASFGS 
SMAAWTFYRQ HLLKPAFWYM AFVATFIGAV LGSILVYLLN AQWLEKALPL LIIGIAIYSL
LSPNAISDTD CQAPTQTQPK LKQSLQGLIL GAYDGFAGPG IGAFWTVSSG TLYKLPLLHS
CALARAMTFT SNLTALAIFG YLGQVHWQIG LWMGLSMMLG SFVGARCAIK FGMPFIRPLF
ILIVLSIAAN LAWSAWF