Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1793 |
Symbol | tig |
ID | 1169566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1880607 |
End bp | 1881911 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637343681 |
Product | trigger factor |
Protein accession | NP_717402 |
Protein GI | 24373359 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAGTTT CTGTTGAAGC AACCCAAGGC CTAGAGCGTC GCCTGACCAT TTCTGTTCCT GCTGAACAAA TTGAAAAACT GGTTAAAGAC AGTTTACAAC GTGAAGCTAA GCGTGCTCGT ATTCCGGGTT TCCGTCCTGG CAAAGTGCCT GTTACTGTCA TCAACAAACG TTATGGCGCA GCTATTCGTC AAGACATCAC TGGTGAAGTG ATGCAACGTA ACTTTATCGA AGCGATCATC GCAGAGAAAT TAAACCCAGC CGGTGCACCG ACTTTTGTAC CTGGTGCGAC TGACGGCGAA AAATTTGAAT TCGTTGCAAC TTTCGAAATC TACCCAGAAG TTGAGTTGAA AGGTTTAGAT GCAATCGTAG TTGAACAGCC AAAAGCGTCA GTGACGGATG CTGATGTGGA CAGCATGATT GAAACGCTGC GCAAGCAACA TGCCACTTTT GCAGCGGTTG AGCGTGAAGC GGTTGATGGC GACAAAGTGA AAATGAACTT TGTGGGCTCA GTTGACGGTG TTGAATTCGA AGGCGGTAAA GCTGAAGATT TCGAACTGCA ATTAGGCAGC GGTCGTATGA TCCCTGGTTT TGAAGCGGGT ATCTTAGGTC ACAAAGCGGG TGAAGAATTC GTTATCGACG TGACTTTCCC TGAGGAATAC CACGCTGAAA ACTTAAAAGG TAAAGCTGCT AAGTTTGCTA TCACCTTAAC TGAAGTGTTA GCGGCTAACT TACCAGAAGT AAACGATGAG TTTGCTGCAT TATTCGGTAT CACTGAAGGT GGCTTAGAAG CACTGAAAAC CGAAATTCGT AAGAACATGA ACCGTGAACT TGAGCAAGCG TTAAAAGCTA ACGTGAAAGA GCAAGTGATC GCAGGTTTAT TAGCTAACAA CGACATCGAA CTGCCAAAAG CACTAATTGA TGGTGAAGTT AACGTATTGC GTCAACAAGC GATGCAACGT TTCGGCGGTC AAACTGCTAA CATGCCTGAA CTGCCAGCTG AATTATTCAC TGAGCAAGCA GCTCGTCGCG TGAAAATCGG TCTGTTATTA GGCGAAGTTA TCAAGACTAA TGAGCTGAAA GCAGAAGATG AGCGTGTACA AGGTTTAATT GCCTCTATGG CTTCTGCTTA CGAAGATCCA AGTGAAGTGA TTGCTTATTA CAACAGCAAC AAAGAACTGA TGCAAAACAT GCGCAACGTT GCGCTTGAAG AGCAAGCTGT TGAAGCACTG CTTAAAACCG CAAAAGTGAC CGAAAAAACA GTCGCTTTTG AAGAATTTAT GAACAAGGCT ACAGGTCGCG CATAA
|
Protein sequence | MQVSVEATQG LERRLTISVP AEQIEKLVKD SLQREAKRAR IPGFRPGKVP VTVINKRYGA AIRQDITGEV MQRNFIEAII AEKLNPAGAP TFVPGATDGE KFEFVATFEI YPEVELKGLD AIVVEQPKAS VTDADVDSMI ETLRKQHATF AAVEREAVDG DKVKMNFVGS VDGVEFEGGK AEDFELQLGS GRMIPGFEAG ILGHKAGEEF VIDVTFPEEY HAENLKGKAA KFAITLTEVL AANLPEVNDE FAALFGITEG GLEALKTEIR KNMNRELEQA LKANVKEQVI AGLLANNDIE LPKALIDGEV NVLRQQAMQR FGGQTANMPE LPAELFTEQA ARRVKIGLLL GEVIKTNELK AEDERVQGLI ASMASAYEDP SEVIAYYNSN KELMQNMRNV ALEEQAVEAL LKTAKVTEKT VAFEEFMNKA TGRA
|
| |