Gene SO_1732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1732 
Symbol 
ID1169512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1815974 
End bp1816648 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content44% 
IMG OID637343625 
Productcold shock domain-contain protein 
Protein accessionNP_717342 
Protein GI24373299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGGAA AAGTTGTCTC ATACCTTGCC GCTAAAAAGT ATGGGTTTAT CCAAGGTGAT 
GATGGTGAAA GCTATTTTTT GCATTTTTCT GAGCTATTAG ACAAGAAAGA TGAAGGCAAG 
TTAGTCAAAG GCAGTATGGT CCATTTTGAT CCCACGCCCA CACCTAAAGG CCTAGCCGCC 
AAAGCGATCA GTTTGCCCGA AGTCTTTATC AGGGAGCGAT TAGTTGACTT TTTTACCACT 
AGAGACAATC GCCCTAAAAA CGGCACAGTG ATAGCAAGTT TTCCTATTGC AACCCGTTTT 
TTTAAAGACC CCAGCGAAGG AAGACGTCAT TTAGAACAGC TTGCAAAGCA TTGTGGATGC 
AATGCAGTAC TTAATGTCAG TTTTGAGAAA GACACTTTCT CAAAAGGTAA TTATCGCTAT 
ACGGTACACG CCTTCAAAGG TGAACTCGCC CTCGTAACCG AGAAAGTTCC CGCTGACGCC 
CAAGAACTGG TTGTCGCCTC GGCAGAGTTA CTCGAAAAAC GAAAAGCAGA TGTAGAGCAG 
GCAGTTAAAC AAATGAGTGA AGCCGAAAAT TTAGCACGAC AAAAGCAGTT ATCAGGTTGC 
TTAGGCACCC TAGCCATCAT CACGCTGATA CCACTCGCAC TGGTGCTCAC TGCTATAGCG 
GTTTTTCCTG CTTAG
 
Protein sequence
MKGKVVSYLA AKKYGFIQGD DGESYFLHFS ELLDKKDEGK LVKGSMVHFD PTPTPKGLAA 
KAISLPEVFI RERLVDFFTT RDNRPKNGTV IASFPIATRF FKDPSEGRRH LEQLAKHCGC 
NAVLNVSFEK DTFSKGNYRY TVHAFKGELA LVTEKVPADA QELVVASAEL LEKRKADVEQ 
AVKQMSEAEN LARQKQLSGC LGTLAIITLI PLALVLTAIA VFPA