Gene SO_1695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1695 
Symbol 
ID1169484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1783237 
End bp1784193 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content48% 
IMG OID637343598 
Productsensory box/GGDEF family protein 
Protein accessionNP_717306 
Protein GI24373263 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTACAA CTAAACAGCT TAAGGATACT GAGCTACCGC TGAACTTTTT CGAGCATTCT 
TCCCTCGAGA CCATTGAGCT ATTTATTCAA CATTTAACTG AAGCCATGAT TTTAGTGAAT 
GCCAACGGCT TTATCCGTTC GTGCAATCAG CGCAGTGCCG AGCTACTTGA TTGCCCACAG 
GTCAGTTTAA AGGGCCAAGA TTGGCGCAAT TTTTTGACCG AACATCATCA AGCGCGCTAT 
GACAATCTCC TGAGCCACGA TGTGCAACTA GGCACCAACT GTGGTCAACC CGTGCAGCAC 
CCTGCGCAGG AAACCACACT GATCTGCGCC TCTGGTAAGG CCAAAGATGT TGAATTATCC 
ATCTCTTATA TTCCTGGCCA TGAGCCTATG TTCGTCATGG TCATGCACGA TTTAACTCAC 
CATAAAGCCG AAAACCAAAA ACTGCGCAAG TTGGCCGCCA CGGATTCACT CACACAACTG 
GCTAACCGTC GCTATTTTGA TGAAATGCTG CAACAGCACT GGGAAGAATG CACCGCCAAA 
CTACGCCCCA TCAGCGTAGT CATTATCGAT GTAGATTATT TTAAGGTGTT TAACGATCAG 
TTTGGCCATA TCCAAGGTGA TGAATGCCTT AGAAAAATAG CCAAAGTTAT TGCAGGCATA 
GTGCCAACCG AAATCGGCCT TGCCGCCCGT TATGGCGGCG AAGAGTTTGC ACTTATCCTG 
CCCAATCACA ATGCCAAAAT GGCGCTCACC ATAGCGCAAA AAATCCAGCA AGGGATTAAT 
AATATTCGCT TTACTGACCA AGGCCTCAGG GATTATGTCT CAGTGAGCGC CAGCCAAGGC 
ATAGCCTGTG AAGTCAATGG GCAGTTCCGT ACCTCTCTTG CCATGGTATG CGCAGCCGAT 
ACTGCTCTCT ACCGCGCCAA AGCCGATGGG CGTGACCGGA TAAATACCTC GCTATAG
 
Protein sequence
MPTTKQLKDT ELPLNFFEHS SLETIELFIQ HLTEAMILVN ANGFIRSCNQ RSAELLDCPQ 
VSLKGQDWRN FLTEHHQARY DNLLSHDVQL GTNCGQPVQH PAQETTLICA SGKAKDVELS 
ISYIPGHEPM FVMVMHDLTH HKAENQKLRK LAATDSLTQL ANRRYFDEML QQHWEECTAK 
LRPISVVIID VDYFKVFNDQ FGHIQGDECL RKIAKVIAGI VPTEIGLAAR YGGEEFALIL 
PNHNAKMALT IAQKIQQGIN NIRFTDQGLR DYVSVSASQG IACEVNGQFR TSLAMVCAAD 
TALYRAKADG RDRINTSL