| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1637 |
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| Symbol | |
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| ID | 1169431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1718937 |
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| End bp | 1721417 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637343545 |
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| Product | surface antigen |
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| Protein accession | NP_717248 |
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| Protein GI | 24373205 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTGA ATAAACTTTT TGCCTCGATG TTATTCGTCG GTGCGTCGTT TTCAGGGACT
GTGTTGGCGG ATACTTTCCA ACCCTTTGAA GTGACCGACA TCCAAGTTGA AGGTTTGCAG
CGAGTCGCAC TGGGTGCTGC CTTGTTAAGC TTACCTGTGA AAGTGGGTGA CACTGTAGAT
CAGTTAAAAC TTCAGCAAGC CATTAAAAGC CTGTATGCAT CGACTAACTT TGAAAATATT
TCAGTCAGTC ATGAAGATGG CGTGCTTATT GTCAAAGTGA CGGAGCGGCC AACCATCAGT
GCCGTGACCT TTGAAGGCAA CAAAGACATT AAAGATGAGC AGTTACAGGA AAGTCTGGAC
GGCTCTGGTG TTAAAGTCGG CGAATCCTTA GACCGTACTA TGCTCACAGG CATTGAAAAG
GGTTTGCAAG ACTTTTACTA CGGCGTGGGT AAGTATGGCG CTAAAGTTGA AGCGCAAGTC
ATTAACTTGC CTCGTAACCG TGTCGAACTT AAGTTCAAAT TTACCGAAAG TTTAGCGGCC
GAAATCCGCC AAATTAACGT GGTTGGTAAT CATGAGTTCA CTGATGCTGA GCTTATTGGC
ATGTTAGAAC TTAAAGATTA TGTGGCATGG TGGGATCTGT TTGGTGAGCG CCGCTACCAG
AAGCAAAAGC TTCAAGCCGA CCTTGAAACG ATTAAAACCT ATTACCACAA CAAGGGTTAT
ATCCGCTTTG AAGTCACCTC GACTCAAGTG GCGATGACGC CTGACCGTAA AGGCTTATAT
ATCACCATCA ACGTTAACGA AGGTGAAAAG TACAAGGTCA AAGACGTTAA CCTCACGGGC
GATCTGATGG GCCGTGAAGA GTTAATGAAA TCGATTCTAC CAATCAAAGC GGGCGATATG
TACAACGGCG GTGATGTTAC CTTCGCCGAA GAGATGTACA GCAAGTATTT AGGTCGCTTC
GGTTATGCCT ATCCTGAGGT AAAAACCTAC CCTGAAATTG ATGATAAAAC CAAGGAAGTG
ACCTTAAACA TCAATATCAA ACCGGGTAAG CGTGTTTATG TTCGTTCCAT CAACTTTACG
GGCAATACAG TCACTGAAGA TGAAGTGATG CGCCGTGAAC TGCGTCAGAT GGAAGGTGCT
TGGTTAAACT CTGCGCAAGT TGAGCAATCT AAAGCGCGTC TTAACCGTTT GGGCTTCTTT
GAAACCGTTG ATACTGAAAC GATTCAAGTC CCAGGTACCG ATGATTTAGT CGATGTGGCC
GTTAAGGTGA AAGAACAGCC TTCCGGTTCA TTCAACGCCG GCGTAGGTTA CGGTACTGAA
TCAGGTCTAA GCTTGCAGTT TGGTGTGCAG CAAAATAACT TCCTCGGAAC GGGTAACCAA
GCGGGGGTGA GTTTAAGCAC CAACAAGTAC TCTAAAAACG TTAACTTATC TTACACCGAT
CCGTACTGGA CCAAAGATGG TGTGAGCTTA GGCGGAAGCG TTTACTGGAA CGAGTTTGAT
GCGAACGAAG CTAACCTTGA ACGCTATAAA AACAGCTCCT ATGGTGTGGC GTTAAACTCT
GGCTTCCCGA TTAACGAATA CAACCGTATC AACGGTGGTA TTGGCTATCG TCATAACACG
ATTTCGGAAA TCTCCGCCTA TGAGCAGGCG CTGCGTTTCT ATAACATTTA CCGTGACGAT
GATCCAAATG CTGACTTAAG TTTTGATAAC TTTGAACTGA GTTTGGGCTG GTATCGCAGT
ACCTTAAACC GTGGCACCTT CCCTACGGAC GGTTCGTCAC AGCGTTTAAG CGGTAAGATG
ACAGTCCCTG CATCAGATCT GCAGTACTTT AAGACTGATT TCGATACCAA CTACTATTTC
CCCATCAACC GTAGTCAAAG TTTTGTGCTC TTAGCTCGCG GTCGTTTAGG TTATGGTAAC
GGTTATGGTC AATATAATGA TAATGACCAA ATTCTGCCGT TTTGGGAGAA CTACTATTCA
GGTGGAAGTA GTTCGCTGCG TGGCTTTAAA TCTAACTCGG TTGGCCCGCG TTCATTTTAT
CTTTTCCGTG GTAGTGAACC GTGCTCGCCT GATCCATCGG GTGATGGCTG TAGCTTGCCG
GGCGATCCAA ACAAAATTCA GGTCAGTTCT GGTCGTTCAA TCGGGGGTAA CGCCATTGCG
ACAGCGAGTT TGGAGTTAAT CGTTCCAACG CCATTCTTGG ATGAGGCTTA TACCAACTCT
GTACGTACCA GTTTCTTTGT TGATGCCGGT AACGTGTGGG ATACGGAATT TGATTACGCT
AAGTATCAAA CCTTACCCGC TGAAGAGTTT GATAAGTTGC AGGACTATAG TGACCCTGCG
CGTATTAGGG CATCGTGGGG CGTAAGCTTA CAGTGGTTAT CACCTATGGG CCCTATGGTA
TTCAGTTTGG CATGGCCGGT TAAAGAATAC GAAGGCGATC AAACAGAGAT CTTCTCGTTC
AATATTGGCA AAACTTTTTA A
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| Protein sequence | MRLNKLFASM LFVGASFSGT VLADTFQPFE VTDIQVEGLQ RVALGAALLS LPVKVGDTVD
QLKLQQAIKS LYASTNFENI SVSHEDGVLI VKVTERPTIS AVTFEGNKDI KDEQLQESLD
GSGVKVGESL DRTMLTGIEK GLQDFYYGVG KYGAKVEAQV INLPRNRVEL KFKFTESLAA
EIRQINVVGN HEFTDAELIG MLELKDYVAW WDLFGERRYQ KQKLQADLET IKTYYHNKGY
IRFEVTSTQV AMTPDRKGLY ITINVNEGEK YKVKDVNLTG DLMGREELMK SILPIKAGDM
YNGGDVTFAE EMYSKYLGRF GYAYPEVKTY PEIDDKTKEV TLNINIKPGK RVYVRSINFT
GNTVTEDEVM RRELRQMEGA WLNSAQVEQS KARLNRLGFF ETVDTETIQV PGTDDLVDVA
VKVKEQPSGS FNAGVGYGTE SGLSLQFGVQ QNNFLGTGNQ AGVSLSTNKY SKNVNLSYTD
PYWTKDGVSL GGSVYWNEFD ANEANLERYK NSSYGVALNS GFPINEYNRI NGGIGYRHNT
ISEISAYEQA LRFYNIYRDD DPNADLSFDN FELSLGWYRS TLNRGTFPTD GSSQRLSGKM
TVPASDLQYF KTDFDTNYYF PINRSQSFVL LARGRLGYGN GYGQYNDNDQ ILPFWENYYS
GGSSSLRGFK SNSVGPRSFY LFRGSEPCSP DPSGDGCSLP GDPNKIQVSS GRSIGGNAIA
TASLELIVPT PFLDEAYTNS VRTSFFVDAG NVWDTEFDYA KYQTLPAEEF DKLQDYSDPA
RIRASWGVSL QWLSPMGPMV FSLAWPVKEY EGDQTEIFSF NIGKTF
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