| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1526 |
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| Symbol | ispA |
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| ID | 1169335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1603073 |
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| End bp | 1603954 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343455 |
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| Product | geranyltranstransferase |
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| Protein accession | NP_717143 |
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| Protein GI | 24373100 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAGTCA ATGCAATAAA AGAATATCAA CTGCGGGTTG ATGACCAATT AAAACAACGT
TTTAGTACAC TCGAAGATAC AGCTCCTCAG TTAAAAGCCG CGATGACCCA TGGCGCCCTT
TTAGGGGGAA AACGCATTCG TCCCTTCTTG GTTTACAGTG TGGGGCAAAT GTTTGGCGTA
CCACTTGAAA AACTCGATGC CTGCGCCGCC GCCATTGAAT GTATCCATGC CTATTCGTTA
ATCCATGACG ATTTACCCGC CATGGATGAT GATGCGCTTC GCCGGGGTCA ACCCACTGTA
CATATCGCTT TCGATGAAGC CACCGCCATA CTTGCTGGCG ATGCACTGCA AACCTTAGCC
TTTGAAATTG TGACTGAAGC AGTCCCTGGG ATTACGAGCG AGCAACATAT CGCTATGGTC
AGGGCATTGG CAAAAGCCTC GGGTTATCGG GGGATGTGTG GCGGTCAAGC TATCGACTTA
GCTTCTACCG ATAAGCACAT TGATCTTAAA GCATTAACTC AACTACATAA TATGAAAACA
GGGGCGCTTA TCAGCTGCGC CGTTGAGTTA GCGTTGATTG CCGCGAATGC GCCAAAAGAT
CAATATCAGA CTATGATGGA ATTTGCCCAC GCGGTAGGAC TTGCCTTCCA AGTGCAAGAC
GATATTCTGG ACATTATTGC CACCACAGAA GAACTCGGCA AACCCCAAGG CTCCGATGCC
GAGTCAAATA AGAGTACTTT TCCGCAACTA CTTGGACTGC AAGGCGCCAA AGATACCGCC
ACGCAACTGA TCCAAGAGGC ACTATCAGCG CTGGCTAAAT TGCCATACAA TAGCCAGTTA
ATTGCAGACT TCGCCCGCTA TATTATTGAG CGAAGAATAT AA
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| Protein sequence | MLVNAIKEYQ LRVDDQLKQR FSTLEDTAPQ LKAAMTHGAL LGGKRIRPFL VYSVGQMFGV
PLEKLDACAA AIECIHAYSL IHDDLPAMDD DALRRGQPTV HIAFDEATAI LAGDALQTLA
FEIVTEAVPG ITSEQHIAMV RALAKASGYR GMCGGQAIDL ASTDKHIDLK ALTQLHNMKT
GALISCAVEL ALIAANAPKD QYQTMMEFAH AVGLAFQVQD DILDIIATTE ELGKPQGSDA
ESNKSTFPQL LGLQGAKDTA TQLIQEALSA LAKLPYNSQL IADFARYIIE RRI
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