| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1428 |
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| Symbol | |
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| ID | 1169245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1489180 |
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| End bp | 1491168 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343368 |
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| Product | outer membrane protein |
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| Protein accession | NP_717048 |
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| Protein GI | 24373006 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTTA AACTAAATAT CATTACCTTG GGATTACTTG CTGCAACCAG TGGCGTGAGT
GCTGCAGACT TTTCTGTGCA CAAAGCTAAT CTGCAAGGGC TAAAGTTGGA TGCTTATCAG
TGTAAAAGCT GCATAGGAGA GAAGCGCTAC CAAGGTGAGC TGCAGTTAAG TGCAGGCTGG
GCCGAGAATG ATGATATTCA TGCGGGGAAT GCGTTTGGTG ATGCCAGCGA TGGGATGCGC
GCGGCTATGG ATGCGGACGT TCGTTATCGC AATGCGGGTT ATGAAGCTAA TGTTCAAGCA
TATCAATTGG GACTAGAGAA TAGCTATGCC CACCTTGATG CGGGTCGGTC TGGACAGTAT
GCGCTAAACC TTGATTATCA ATTATTGACT CGATACGACA GCCGAGCGCA AACGCAGTTG
TGGCACAACA ATGGCGTGCT TTTGCCAGAC ACTGCGACTC GAGATGTCGA TTTACAGCTG
GAACGCGAAA AGGTGGGCTT GGGATTAGCT GCGCAATATG GCGTCATGCA GGCGTTTATT
AACTACGACC ACGAACAAAA AACGGGTAAT CGCCGCAGTA GTTTAGTAAC ACCTCGTCCA
GTTAACTTTG CACTGCCTGT TGATGCTAAC ACTGAAAATC TCAATGCTGG CCTGAATATT
TCGGGCGAAA ATTGGTTAAG CGAGCTGGCT TACCATGGCA GTTTTTACCG AAATAATATT
GATAACTTAA GCTTACCTTA CTTGCCCGAT GTTTATGCTG CTACGCCTGA TAATGATGCC
CATCAAGTCT CGTTATCTGG CCAATACATG CTTGGGCGTG GCACCGTCAA TGGCCGTGTT
GCCGCTGGAC GGATGCTACA AGATGGCGAT TTAATCCAAG TCAGTGGTAA TCCGTTACAG
AGCTGGGATG CTCAGGTTGA TACCTTAGAT GCGCGGCTTG GCTTTAGCAA TATGCTAAGC
CCGCGATGGC GTGTTAACGG TCAGGTTGAC TATAGCGAAC GCGATAATAA AAGTTCGGTA
TGGGAGTTTG CGCAATTAGA GTTTGATAAT GTCAGCGGTG CGTTTAAGCA AAATGTCCCC
ATGGACATCG AAAGACTGAC ATACAAACTC CACAGTAGTT ACCGTTTCAA CAGTCAATAT
CGCCTTATGG GCGGTTATGA CCGTAAAGAG GTAGAACGCA GTTACCTTGA GCGAGAACAA
ACCCATGATG ACGCATTTTG GGCCAAGCTG AATATCAGAG CCTTGCCAAA TACTGTGATT
GATTTTGGTG GGCGCTACGA GAACCGCAGC GGCTCTGTCT ACAACGCTGT TGAAAATACC
TCGATTGAAG AAAATCCGCT ATTACGTAAG TTTTATCTCG CAGACCGTGA ACGTCAGGCG
GTTGAGCTAA AGGCGAATTA TGTACCGCTT TCGTGGTTGA CTCTTGATTT GAATGGATAT
TATGCCAAGG ATGATTACGC TAAAACCATT ATAGGCCTCA CCGAATCAAC CGATTATGGT
TATGACCTGC AACTGGGGAT GCAACTCTCT GAGCAATTGC ACCTCTATGC CTCAGCAAGT
CAACAATGGA TAGACTCCGC TATCGCGGGT AGCCAATCAT TTTCCTCACC AGACTGGTAT
AGCGATATTG CTGATGAGTT CATCAATTTA GGTGCAGGGT TTACCTATAG CGGTTTATTG
GATGACAGGC TGACTCTGGG AGGGAACTAT TTATTCTCCA ACTCCGCAAG TGATAGCTTA
ATCTCCTATA ACGAGGTCCA GCCATACGGT GATTACTACT CCTATAACCA CAGTGTCGAG
CTCTATGGGC GCTACGCCTT GAGTGAGCGT ATGGGGCTCA AGTTAAGTTA TCAGTACGAG
CGTTATTACG ACACCGACTA TAGCCAATCC GCAGTCAATA GCATTCCTGG GTTAATCACC
CTAGGCGACT TAAACCATAA CTACAACGCG CACTTGCTGA TGTTTACCTT CAGCTACCTG
CTGCCTTGA
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| Protein sequence | MSFKLNIITL GLLAATSGVS AADFSVHKAN LQGLKLDAYQ CKSCIGEKRY QGELQLSAGW
AENDDIHAGN AFGDASDGMR AAMDADVRYR NAGYEANVQA YQLGLENSYA HLDAGRSGQY
ALNLDYQLLT RYDSRAQTQL WHNNGVLLPD TATRDVDLQL EREKVGLGLA AQYGVMQAFI
NYDHEQKTGN RRSSLVTPRP VNFALPVDAN TENLNAGLNI SGENWLSELA YHGSFYRNNI
DNLSLPYLPD VYAATPDNDA HQVSLSGQYM LGRGTVNGRV AAGRMLQDGD LIQVSGNPLQ
SWDAQVDTLD ARLGFSNMLS PRWRVNGQVD YSERDNKSSV WEFAQLEFDN VSGAFKQNVP
MDIERLTYKL HSSYRFNSQY RLMGGYDRKE VERSYLEREQ THDDAFWAKL NIRALPNTVI
DFGGRYENRS GSVYNAVENT SIEENPLLRK FYLADRERQA VELKANYVPL SWLTLDLNGY
YAKDDYAKTI IGLTESTDYG YDLQLGMQLS EQLHLYASAS QQWIDSAIAG SQSFSSPDWY
SDIADEFINL GAGFTYSGLL DDRLTLGGNY LFSNSASDSL ISYNEVQPYG DYYSYNHSVE
LYGRYALSER MGLKLSYQYE RYYDTDYSQS AVNSIPGLIT LGDLNHNYNA HLLMFTFSYL
LP
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