| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1273 |
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| Symbol | |
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| ID | 1169093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1321703 |
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| End bp | 1322518 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343218 |
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| Product | polyamine ABC transporter, permease protein |
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| Protein accession | NP_716896 |
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| Protein GI | 24372854 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC TGAGTTTTTC TTCCGTAATG CTGTGGTTTG GACTGTTATT TTTATACGCG
CCTATGCTGA TTTTGGTCAT TTATTCTTTT AACGAGTCCA AGTTAGTAAC AGTATGGGGT
GGGTTTTCAC CTAAGTGGTA CGGTGAACTA TTTAAGGATC AACAAATCCT CGATGCGGTA
TGGACCAGTT TGCGGATTGC CTTTTACAGC TCAACGATGG CGGTAATTAT TGGCACTATG
GCTGCGTTTG TTATGACGCG CTTTAAGCGT TCATGGGCTA AGTTAACCCT GTCGAATATG
ATTACCGCTC CCTTGGTTAT GCCCGAGGTG ATAACGGGTT TGTCATTGCT ACTGCTGTTT
GTGCATATGG CGGATCTCCT TGGTTGGCCA AAAGAGCGCG GTATGGTGAC TGTATGGATT
GCCCATTCGA CCTTCTGCGC GGCTTATGTG GCTGTGGTTG TGTCTTCAAG ATTGCGTGAG
TTAGATAGGT CAATCGAAGA GGCTGCAATG GATTTGGGTG CGACACCGCT CAAGACCTTC
TTCCTCATTA CTGTGCCGAT GATTTCACCG GCGCTGGTGG CGGGATGGTT ATTATCCTTT
AGCTTGTCAC TGGATGACTT GGTGATATCA AGCTTTGCCT CTGGCCCAGG TGCGACCACC
TTACCTATGG TGGTGTTCTC TTCGGTTCGT CTTGGGGTAT CGCCTAAAAT TAACGCCTTA
GCGACCCTGA TTATTCTCTG CGTATCGTTA ATTGCCTTCC TTTCTTGGTA TATGGCAAGA
CGCGCAGAAA AACGTGAGCG GATGCCGCTT AATTAA
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| Protein sequence | MKKLSFSSVM LWFGLLFLYA PMLILVIYSF NESKLVTVWG GFSPKWYGEL FKDQQILDAV
WTSLRIAFYS STMAVIIGTM AAFVMTRFKR SWAKLTLSNM ITAPLVMPEV ITGLSLLLLF
VHMADLLGWP KERGMVTVWI AHSTFCAAYV AVVVSSRLRE LDRSIEEAAM DLGATPLKTF
FLITVPMISP ALVAGWLLSF SLSLDDLVIS SFASGPGATT LPMVVFSSVR LGVSPKINAL
ATLIILCVSL IAFLSWYMAR RAEKRERMPL N
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