Gene SO_1250 details

Gene Information

• Locus tag: SO_1250
• ID: 1169073
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1300789
• End bp: 1301319
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637343198
• Product: hypothetical protein
• Protein accession: NP_716873
• Protein GI: 24372831
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG3154] Putative lipid carrier protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGCTG TTTTTTCGGC TAATCTTGCA AAACAATTGT TAGAGCTCAC CCCAAAACTG 
ATCCGTTTTC CACTGGCTAA GGTGCCCTTT AGCCTAAAAG CCAAGGTGCT GAGCCAATTA 
TTGGCACAAC TGCTTGCGCC GCAGGCCGAA GATGGGGAAT TGGATTTTCT CGCCGATAAG 
TGGGTGGCGA TTCGTGTGGA AGATTTGCAA CTGTACTTTG AGGTGAGTTT TAATGGCCGC 
TGGCAGGTAC GTGAACTCAC CGATGCGCAA GTGACCTTTA GTGCCAAGTC AGCCGAATTA 
TTGCTAGTCG CGGCGGCGAA AGAAGATCCA GATACATTAT TTTTCCAACG CAAACTCAGC 
ATCGAAGGCG ATACCGAGTT AGGGCTTGAG GTGAAAAATC TGCTGCTCAG TATCGAATTT 
GCCAGCTTAC CTGCACCGAT CCGTTTAAGC GTCGAAAAAC TTGCCGATGC GATCGTGCGT 
TTACAACTTG AGGCAAAACC GACGGTTATC CTAGCAAAAT CCCCCGCTTA G 

 

Protein sequence

MSAVFSANLA KQLLELTPKL IRFPLAKVPF SLKAKVLSQL LAQLLAPQAE DGELDFLADK 
WVAIRVEDLQ LYFEVSFNGR WQVRELTDAQ VTFSAKSAEL LLVAAAKEDP DTLFFQRKLS 
IEGDTELGLE VKNLLLSIEF ASLPAPIRLS VEKLADAIVR LQLEAKPTVI LAKSPA