Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1232 |
Symbol | torA |
ID | 1169058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1282265 |
End bp | 1284754 |
Gene Length | 2490 bp |
Protein Length | 829 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637343183 |
Product | trimethylamine-N-oxide reductase |
Protein accession | NP_716855 |
Protein GI | 24372813 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases [TIGR02164] trimethylamine-N-oxide reductase TorA |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGAA GAGACTTTTT AAAAGGCTTA GCCTCAACCT CTTTCGTTGC TTTAGGTGGC AGCTCAGTAC TAGCGCCCTT AAATGCGCTG GCCAATACTG GCCTGAATGA AAACGAATGG CTGACCACTG GCTCCCACTT CGGTGCCTTT AAAATCAAGC GTAAAAACGG CATGATTGCC GAAGTCAAAG CCTTCGATTT AGATAAATAT CCAACGGATA TGATTAACGG TATCCGGGGT ATGGTCTATA ACCCATCCCG CGTGCGTTAC CCGATGGTTC GCTTAGACTT TTTACTAAAA GGCCATAAGA GTAATACCCA GCAGCGGGGG GATTTCCGCT TTGTTCGTGT GACCTGGGAT AAAGCATTAA AGCTGTTTAA ACACTCACTC GATGAGGTCC AAACCAAGTA CGGTCCATCG GGCTTACACG CAGGACAAAC TGGTTGGCGC GCCACGGGGC AACTGCATTC CAGCACCAGC CATATGCAGC GCGCGGTGGG GATGCACGGT AATTTTGTGA AGAAAATCGG CGACTACTCC ACCGGTGCAG GCCAAACCAT TCTGCCCTAT GTATTAGGCT CAACCGAAGT ATATGCCCAA GGCACCTCTT GGCCACTGAT CTTAGAAAAC AGCAACACGA TTGTGCTGTG GTCAAACGAT CCTTACAAAA ACCTGCAAGT GGGCTGGAAC GCTGAAACCC ATGAGGCCTT TGCGTACCTC GCGCAATTAA AAGAGAAGGT CAAACAGGGT AAAATCCGCG TGATCAGTAT CGACCCTGTG GTGACTAAAA CCCAGGCTTA CCTTGGCTGT GAGCAGTTGT ATGTGAACCC ACAGACTGAC GTGACGCTGA TGCTGGCCAT CGCCCATGAG ATGATCACCC AAAAGCTACA CGATGAGAAA TTCATCCAAG GTTACAGCTT AGGCTTTGAA GAGTTTGTGC CTTACGTGAT GGGCACTAAA GATGGTATCG CCAAAACCCC TGAGTGGGCG GCGCCTATCT GCGGTGTTGA ACCACACATT ATCCGCGATC TGGCCAAAAC CTTAGTTAAG GGCCGTACCC AAATAATGAT GGGTTGGTGT ATTCAGCGCC AACAACACGG TGAGCAACCT TACTGGATGG CCGCAGTACT TGCGACCATG ATAGGCCAAA TCGGCTTACC CGGCGGTGGT ATTAGCTATG GTCACCACTA CTCCAGTATT GGTGTGCCGG CGACCACAGC TGCAGCTCCG GGCGCTTTCC CACGTAACTT AGACGAGAAT CAAAAACCGC TGTTTGACAG CACAGACTTT AAAGGCGCAA GCAGCACGAT TCCCGTTGCC CGCTGGATTG ATGCGATTCT CGAACCCGGC AAAACCATTG ATGCCAACGG TTCTAAAGTG GTATATCCCG ATATTAAGAT GATGATTTTC TCGGGTAATA ACCCATGGAA CCACCATCAA GACCGTAACC GCATGAAGCA AGCCTTCCAA AAGCTTGAAT GCGTGGTCTC TATTGATGTG AACTGGACAG CCACTTGTCG TTTCTCCGAC ATCGTGTTGC CAGCTTGCAC CACCTATGAG CGTAACGATA TCGACGTGTA CGGTGCCTAT GCCAACCGCG GTATTCTGGC GATGCAGAAA ATGGTCGAGC CTTTGTTTGA AAGCTTGTCT GACTTTGAGA TCTTTACTCG TTTTGCCGCG CTGCTGGGTA AAGAGAAAGA ATACACCCGC AATATGAGCG AAATGGAGTG GATAGAAACC CTCTATAACG AGTGTAAAGC CGCTAACGCC GGTAAGTATG AGATGCCTGA CTTTGCCACC TTCTGGAAGC AAGGTTATGT ACACTTTGGT GAAGGCGAAT TATGGACGCG CCACGCTGAC TTTAGAAACG ATCCTGAAAT CAACCCATTA GGCACGCCTT CCGGTTTGAT TGAAATCTTC AGTCGTAAGA TTGAACAATT TGGCTATGAT GACTGCCAAG GCCATCCTAT GTGGATGGAA AAAGCTGAAC GCAGCCATGG TGGTCCAGGT TCGAATAAAT ATCCTATGTG GTTGCAATCT TGCCATCCGG ATCACCGCTT ACACTCACAA ATGTGTGAGT CAAAGGAATA CCGCGAAACC TACACAGTTA ATGGTCGCGA ACCTGTGTAT ATTAGCCCTG AAGATGCTAA AACCCGTGGC ATTAAAGATG GCGATATCGT GCGGGTCTTT AACGACCGAG GTCAACTGTT AGCTGGCGCA GTGGTATCGG ATCGTTTCCC TAAAGGTGTA GTGCGAATTC ATGAAGGTGC ATGGTATGGC CCAGTGGGTA AAGATGGCAG CGTTGAAGGC GGAGCCGAAA TCGGTGCCCT GTGCAGCTAT GGTGACCCTA ATACCCTAAC CTTAGACATT GGTACCTCTA AGTTGGCTCA AGCTTGCTCA GCCTATACAT GTCTGGTTGA GTTTGAAAAA TACCAAGGTA AAGCACCTAA GGTTAGCTCC TTCGATGGTC CTATCGAAGT TGAAATCTAA
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Protein sequence | MNRRDFLKGL ASTSFVALGG SSVLAPLNAL ANTGLNENEW LTTGSHFGAF KIKRKNGMIA EVKAFDLDKY PTDMINGIRG MVYNPSRVRY PMVRLDFLLK GHKSNTQQRG DFRFVRVTWD KALKLFKHSL DEVQTKYGPS GLHAGQTGWR ATGQLHSSTS HMQRAVGMHG NFVKKIGDYS TGAGQTILPY VLGSTEVYAQ GTSWPLILEN SNTIVLWSND PYKNLQVGWN AETHEAFAYL AQLKEKVKQG KIRVISIDPV VTKTQAYLGC EQLYVNPQTD VTLMLAIAHE MITQKLHDEK FIQGYSLGFE EFVPYVMGTK DGIAKTPEWA APICGVEPHI IRDLAKTLVK GRTQIMMGWC IQRQQHGEQP YWMAAVLATM IGQIGLPGGG ISYGHHYSSI GVPATTAAAP GAFPRNLDEN QKPLFDSTDF KGASSTIPVA RWIDAILEPG KTIDANGSKV VYPDIKMMIF SGNNPWNHHQ DRNRMKQAFQ KLECVVSIDV NWTATCRFSD IVLPACTTYE RNDIDVYGAY ANRGILAMQK MVEPLFESLS DFEIFTRFAA LLGKEKEYTR NMSEMEWIET LYNECKAANA GKYEMPDFAT FWKQGYVHFG EGELWTRHAD FRNDPEINPL GTPSGLIEIF SRKIEQFGYD DCQGHPMWME KAERSHGGPG SNKYPMWLQS CHPDHRLHSQ MCESKEYRET YTVNGREPVY ISPEDAKTRG IKDGDIVRVF NDRGQLLAGA VVSDRFPKGV VRIHEGAWYG PVGKDGSVEG GAEIGALCSY GDPNTLTLDI GTSKLAQACS AYTCLVEFEK YQGKAPKVSS FDGPIEVEI
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