| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1225 |
|---|
| Symbol | |
|---|
| ID | 1169051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 1271672 |
|---|
| End bp | 1274050 |
|---|
| Gene Length | 2379 bp |
|---|
| Protein Length | 792 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637343176 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_716848 |
|---|
| Protein GI | 24372806 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTAG ATAACCATAG TGCGCTCATA GAACAGCTCA AGCCGCTGCT CATGGAACCT
AACTTCCAAG AGATTTTTCA GCAGCTGACT GCCGATGAAA ACAATTCGAC CCGTTTTCTG
TTGAAAATGG AGTTGAGTCG TTTAGCCTCG CCCTGCACGC GGATTATTGA CCTGAGGGAC
AAGTCTGAGT TGCTCTGCAC TGAAGTCATG CTAGGTCAAC AACACCATTT TCTTGATGAA
CCCGCTAAGC ATAGCCTGCA AGAGGCAATG TCCTTATATC GCAACAAATA CACTATGGGT
GTGTATGAAT ACGTGATCGC CGCCCATCAG CTCAGGCGAC AAAAACTGCG TCAAGTAGTA
CAGCAAAGCG ATACAGTCGA TCCCGAACCC TTTATGGTAC CCGGAGTCGT GCTCGGCAGT
TATTTTAATC GTGCCGAAGA GCGAATGAAT TACAGTATCC GCATCGCGGT TTCCCAACCT
GGGCGACCTG AAATACTCGG GATCACCATC GATTTGTCCA TTGGCGGCGC TCGCATTCGA
CTCTCTGCTA ATCATCCTTT CGATCTCGAT AAGCCGCTAA AGGTGAAACT CCTTGAGTTA
AGTGAAGAAT ATTACTATCC CGATCTGCAA CTTGGGGTCG ATTACCACAT CGTCGATAGC
GAAACCAATG GTGAGTTTCT TTGGTTGAGA TTAAAACGTA TTGGTGGCAC TGATGCCCTA
GGTGAAATGC TTGGCAATTT AATTCGAGGT TATAAACTCC GCTATAAATT AGATGTTAAC
GACGTATTAG TCACAGCATC AGGCCTGGGT TTCGAGCGCC ATTATTTGCC ACATTTGCCA
CATTTGCCTT TATTTCTGAA TCAACAAACG CAATCCATCA GCCATATGTT GCTGAGTCGG
GATAATCAGC AAATAGTGCA TTATTTTCAA GATGAAAATG ATATCAGCCA GTTACCCGCA
ATGCTGACAT CCTCACGGCT TTCGGCACTC TTTAGCCATC CGGAAAATCC TGACTACAGC
CTATTTTTTA CGTTTACCTA CAATGCTCAG GGCTGCTTGT ATTTTTATTC GGCCACCTTA
GCCGAATTAA AAGCTAAAGG TCTGGTGCCA TTGTTTTTAG GTTTTGCTTC AACCAAACCA
AGTTGGCGTA TTTTTAAACT GGTCTCAGAT AAAATTTACC ATGCCAAAGG TTATCGCCGA
GCCACGTTGC CGGGGGATGA AACCCAATAC AGCCCGCTGG TGGAACAACA GTTGTCGCAG
TTCAGCCATT TGTTGCAACT CGTTGATTTA ACAAATGAGG ATGAAAGGGA AACCTACAAG
GCGTGGCAGG ATGATAGCAA TGCCAATACG CTAAAAGCCT TCGGTCAGCA ACGACTCACC
GCCCATCAAA TCAAACCGAT TCCAATGCAA TTTAGTGAAC GTCGCCAAGA AGCCCGTTTT
GCATTTAAAA CCTTAGTCAA TATCTCGCAG GACAACCTTA AAGCGACTGG GATTACCTTG
GATATCTCGG GTCGAGGCAT GCAGCTCACA CTCGATAATC CCACCGAGTT TGTAGTCAAC
AAACCCTTGA TGATCTGTTT ACCCAAACTG CAAACCATTG CCGGCAAAAC TCAGCTCGAT
AATTTACCCT ACCGCCTAGT TCGAACCCGT AAGAATGGCG TGACCTTGCA TTTAGCCGCA
GTAATGGGTC ATACACCCCA TGTCGGCGTT GAGTTTTTAA ATAAACTGAT CGCCCACAAT
AAAGAAAAAT TAGAGCAACT CACTGAAAAT AACAGTGAAG CAAACGAGCT TGCTGATGGT
CTTAAAAATA TTCTGTTACG TGAACTCCAT TCTGTGCCCT ACTTTGTTGA AAAAACAACA
AAATCAGCAC AAGTGACCTG CTTAGGCGTC AGTACTGAGC ATGATGAAAT CAGCAGTATT
TTTGCCGCAG GTTCGTCAGA TACGCTGCAA TATAATCTTG CACCGCTGCT AAAGGATGGC
TTCTGTAAAC GGGATATTCT TGACCCTATC CGCCAAATGA AACCCCAGCA GGATATGGAT
TTTATTGAAG TTTTTATTCA GCTCACGCGC CAGTCCCGCG GCCGATTCCA TTTAAAATGT
ATCCCCGCAA CTGAAGTGGG TGACGCCCAA GCCAAAGTCG CGTTTATCAC CCAAAGTAAG
CTGACTGGAC GCTTTATGGC ACTACGAATT TACCGAGGGG CCACCGAGAA ACCAGATATG
GGGTATCTGC GTCGCGAATT GGAATATATC AATATCCACG CGAATCACAG GGCAAAACAG
CTTGAAGAAC AACTGTGGCG CATTATCGGC GTGGGGGAAT TACTCGATAT CACACAAGAG
GTGGAATTAA GATACCCGGC GCTACAAAAA CTTCCCTAG
|
|---|
| Protein sequence | MSLDNHSALI EQLKPLLMEP NFQEIFQQLT ADENNSTRFL LKMELSRLAS PCTRIIDLRD
KSELLCTEVM LGQQHHFLDE PAKHSLQEAM SLYRNKYTMG VYEYVIAAHQ LRRQKLRQVV
QQSDTVDPEP FMVPGVVLGS YFNRAEERMN YSIRIAVSQP GRPEILGITI DLSIGGARIR
LSANHPFDLD KPLKVKLLEL SEEYYYPDLQ LGVDYHIVDS ETNGEFLWLR LKRIGGTDAL
GEMLGNLIRG YKLRYKLDVN DVLVTASGLG FERHYLPHLP HLPLFLNQQT QSISHMLLSR
DNQQIVHYFQ DENDISQLPA MLTSSRLSAL FSHPENPDYS LFFTFTYNAQ GCLYFYSATL
AELKAKGLVP LFLGFASTKP SWRIFKLVSD KIYHAKGYRR ATLPGDETQY SPLVEQQLSQ
FSHLLQLVDL TNEDERETYK AWQDDSNANT LKAFGQQRLT AHQIKPIPMQ FSERRQEARF
AFKTLVNISQ DNLKATGITL DISGRGMQLT LDNPTEFVVN KPLMICLPKL QTIAGKTQLD
NLPYRLVRTR KNGVTLHLAA VMGHTPHVGV EFLNKLIAHN KEKLEQLTEN NSEANELADG
LKNILLRELH SVPYFVEKTT KSAQVTCLGV STEHDEISSI FAAGSSDTLQ YNLAPLLKDG
FCKRDILDPI RQMKPQQDMD FIEVFIQLTR QSRGRFHLKC IPATEVGDAQ AKVAFITQSK
LTGRFMALRI YRGATEKPDM GYLRRELEYI NIHANHRAKQ LEEQLWRIIG VGELLDITQE
VELRYPALQK LP
|
|---|
| |