Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1106 |
Symbol | nqrD-2 |
ID | 1168939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1149550 |
End bp | 1150182 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637343057 |
Product | Na(+)-translocating NADH-quinone reductase subunit D |
Protein accession | NP_716732 |
Protein GI | 24372690 |
COG category | [C] Energy production and conversion |
COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGACG CTAAAGAACT GAAACAGGTT CTGACTGGAC CTATCGTCAA CAACAACCCG ATTGCATTAC AAGTTCTTGG TGTATGTAGT GCGTTAGCGG TAACGAGCAA GCTCGAAACT GCACTGGTGA TGGCGTTGGC ATTAACTGCG GTAACAGCGT TTTCTAACCT GTTTATCTCA ATGATCCGTA ATCATATTCC TAGCAGCGTA CGTATTATCG TACAGATGAC CATTATTGCC TCTCTGGTAA TCGTGGTTGA CCAATTGCTG CAGGCTTATG CTTATCAGAT TTCTAAGCAA TTATCGGTAT TCGTCGGCCT TATTATTACG AACTGTATCG TAATGGGTCG CGCTGAAGCC TATGCGATGA AAACACCGCC AATGATGAGT TTTATGGATG GTATTGGTAA CGGTTTAGGT TACGGTGCGA TTCTATTAGC TGTTGGTTTT GTGCGTGAGC TGTTTGGTAA CGGTTCTCTG TTCGGTGTTC AAATCCTGCA CAAGATCTCT GATGGTGGCT GGTATCAACC AAACGGTCTG CTATTACTGC CGCCAAGTGC GTTCTTCCTG ATCGGTATGT TGATTTGGAT TATTCGTACC TATAAGCCAG AGCAAGTTGA AGCAAAAGGG TAA
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Protein sequence | MSDAKELKQV LTGPIVNNNP IALQVLGVCS ALAVTSKLET ALVMALALTA VTAFSNLFIS MIRNHIPSSV RIIVQMTIIA SLVIVVDQLL QAYAYQISKQ LSVFVGLIIT NCIVMGRAEA YAMKTPPMMS FMDGIGNGLG YGAILLAVGF VRELFGNGSL FGVQILHKIS DGGWYQPNGL LLLPPSAFFL IGMLIWIIRT YKPEQVEAKG
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