| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1090 |
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| Symbol | |
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| ID | 1168923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1128548 |
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| End bp | 1129387 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343041 |
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| Product | ApbE family protein, putative |
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| Protein accession | NP_716716 |
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| Protein GI | 24372674 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATACGTA GAGCTAAGCC ATTATTGGGC ACGTTAATAG AAATTGCCGT CGAATCCGTT
GTTGAAGCAT CCTCACAGTC AGCACTCGAT GAGCCAGCCA TTCAAGCTGC GATTACCGCG
GCTTTTTCTC GCATTACCCA AATTGGGCGT TTATTAAGTT TTCATCAGCA AGACAGTGAG
TTAAATCTTT TAAACCGTCA GCCAGGTCAG TGGATCACCC TAAGCCAAGA TAGCCTAAGA
GTGTTCAAGT TAGCCAAATG GTTCGGTAAA GCCAGTGACA ACTTATTTAA TTGCACCATT
GGTGGCGAAA TGATGTCACG CGGGGCGCTA CCTTGTTACC TCGGCATGCC GCTGCTTTTG
CAGGGCGATT GGCAGGATAT TGAAATTAGA GGTAACCAAG CGCGGTTAGC TCGGCCATTA
ATTGTCACTT TTGATGGTAT AGCTAAAGGC TATGCGGTTG ATATGGCAGT CCGTGAGTTA
CGCCGTGCGG GTGTTTCGGG TGGTTGGGTC AATGCGGGAG GGGACTTGAA GGTATTTGGT
TCAGCTTCCT TAGATGTGCT TTGTCGAGGC TCGAATGGAT TAAGCCAAAA GGTGACTGTA
CGTAATATGG CACTAGCAAG CTCACGGGTT TCGCTGCAAT TGAGCTTAGG CTGCCCTGCA
TTACTATTAC CGACTGGCAA TGTCGATATG ATGAGCTTTG ATGCCTCTAA TGAGCGGGTT
GTCAGTGTGC AAGCGCCGTT TGCATGGCGA GCTGATGCAC TCACTAAGGT GGCGGGTTAT
CTTTCTGCCG AAGCCGCTAA AGATAAAATC CAGCAACTCG GTGGCCAGTT AGTCTGCTAA
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| Protein sequence | MIRRAKPLLG TLIEIAVESV VEASSQSALD EPAIQAAITA AFSRITQIGR LLSFHQQDSE
LNLLNRQPGQ WITLSQDSLR VFKLAKWFGK ASDNLFNCTI GGEMMSRGAL PCYLGMPLLL
QGDWQDIEIR GNQARLARPL IVTFDGIAKG YAVDMAVREL RRAGVSGGWV NAGGDLKVFG
SASLDVLCRG SNGLSQKVTV RNMALASSRV SLQLSLGCPA LLLPTGNVDM MSFDASNERV
VSVQAPFAWR ADALTKVAGY LSAEAAKDKI QQLGGQLVC
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