| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0989 |
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| Symbol | |
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| ID | 1168831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1021392 |
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| End bp | 1022282 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637342952 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_716618 |
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| Protein GI | 24372576 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATA TTCAGAGAGT GAAAGCATTT GTTATCGCGG CGCAGTTGGG GTCTGTATCG
GCTGCGGCCC GTCAATTGGG TAAACGTCAA CCCCAAGTCA GTCAGTGGAT TGCCGAGCTT
GAGGTTGATC TCGGTGTTCA GTTGTTTCAA CGTGGGGCTA ATCAAGTTGA ATTGAGTTTA
GCGGGTCAGC ATCTATTGCC TAGGGCAATA TTAGCCTTAT CTCAATGGGA GCAATTTTCC
AGTTCGGCTG CGCATTTTGC AACTTATCAA AAGGGGATAA TTTGTCTCGG TGTGGAAAGC
CATATTCCAT TAAACGGTTT GATAACCGTG GTTAACACTT TTTTTGAGCA GTTTCCTGCG
GTCAATTTCG TGCTGCAAGT CGATAAGTTA ACTGTGTTAA ATGAAGCATT TAATGCAGGC
AATATCGATC TTTTATTACG TCATCAGTCG GATGAATTGC ACTTAACGGA AGTCGGTTAT
TGCCGGATAG GCAAGTATAA AGAAGTGTTA TTAGTTTCAC GGCAAAGCCC ATTAAGTAAA
CAAGCCATTG TTGCACCAAG CGAGTTGGCG ATTTACCGTG AATATGTTTG GGCGGGTGGC
CAAGCATGTT GTGAGGATTT AGAGGTGGGG TTTAGTGGAC ATTATTGTGT GATCCCTGAT
TTAGGGTTAT TAAAAAAACT GCTTATTGAT GGGAGTGGTT ATGCATTTTT ACCTTTGTCC
CTTGCTCAAA CCGAAATAAA CCAGGGGTTG TTAACTGTCG TTAAACTCAA TTGTGAACGA
GAAAATGTCG AACGCGGTTT AGAATTGCGC TGGCACTTTG GATTTGAGTC CAGCGCATTA
GGGCTGAGTT TGTTGGATTT AATCAAAAAT CAGCTGAGTG AGTTAACATG A
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| Protein sequence | MMNIQRVKAF VIAAQLGSVS AAARQLGKRQ PQVSQWIAEL EVDLGVQLFQ RGANQVELSL
AGQHLLPRAI LALSQWEQFS SSAAHFATYQ KGIICLGVES HIPLNGLITV VNTFFEQFPA
VNFVLQVDKL TVLNEAFNAG NIDLLLRHQS DELHLTEVGY CRIGKYKEVL LVSRQSPLSK
QAIVAPSELA IYREYVWAGG QACCEDLEVG FSGHYCVIPD LGLLKKLLID GSGYAFLPLS
LAQTEINQGL LTVVKLNCER ENVERGLELR WHFGFESSAL GLSLLDLIKN QLSELT
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