Gene SO_0914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0914 
Symbol 
ID1168760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp940407 
End bp941603 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content46% 
IMG OID637342881 
Producthypothetical protein 
Protein accessionNP_716543 
Protein GI24372501 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTGA GTGTCATCAG CTCTTTGTTA ACGGGGTTGT TATTATTCCC AAGTGCCAAT 
AGTGTTGGCG AGTCACTTGA GACAGGTGCT GAAAATATAC AGAGCGTGCA AGGCAGCCAG
TCAGTTAAGC TTGAAAGCCA ATTGCCATCC TCAGAATCGA AGCTCGGAGA GATTAAGGCC
AGCATCCAAG CCGCGATAAT GGATTCGCAG CAACCATTTA GTGGCAGTGT TATCCTGCTT
GAGCGGGGCA AGCCACTGCT TGAATTGCAA AAGGGCGAAG GCATCAGTAA AGATTCGCGC
TTTGTGATGG CATCGCTCTC TAAGCAAATC ACTGCAACCT TGATATTGCA GGCGGTCGAT
GCGGGAAAAC TCGATTTAAC TCAAACGCTT AATCATTACC TTGTTGGTGA TGCAAAGGGA
GATAATAAGG CACTAAAAGC CGTTGTGGCG GGCACAAATT CAAGTGCAAA CGCTTTAAAT
CCCGGTCGAT ATGATGAGCG GATTACACTG CATCAACTGC TGACGCATAC ATCGGGCGTC
GATAAACTGG GTAAGGCGAA TCGATTTGAG CCGGGTAGCC AATTTGAATA CTCCAATTTA
GGTTATTCTT TGCTTGGGCA AGTGCTTGAA AAGGTTAATC ACCAATCCTT TGCTGAGCAA
GTGGCGCAGT TTGCAACGCG ATACCAGCTT AATGGTCTGA GTGCTGAGCT TGGCAGTGTT
GCTGCGATTC ACACCAAAGT GCCTTCACTC GCTGTAGGTT TACAGGAAAG CGAGGTGATT
GCCCCCTCTG ATTTAGTGCT TGATGAAGCT TTGTTGCCCG CTGGCGGACT CATTGCCTCA
GCGCCAGCTT ATGCTGCCTT TCAGCAGCAA TTACATGCTG GCAAGTTGCT GAGCGCAGAG
AGTTATCAAT GGATGACTAC GGCGCATACC GAGATCCAAT TTTTATGGCC GAATATGCAC
TATGGCTATG GGGTGAGGAT CAATAAGGAC GATAGCCTTA TCGAATACAG TCATACGGGC
TATTTAACCG GTTATATGTC GATGACATTG CATTATCCCG AATTTAATGT GAATTTGGTG
ATGCTGGAAA ATCTATCGCT AAATCTTAAT GATCGCGCTC GAGTATTTGA ACTGCATAAT
CAGATACGCC AAATTATCCG TAGTCAGTTG CTGCTTGCTA AAGCTTCTAA TGTTTAA
 
Protein sequence
MRLSVISSLL TGLLLFPSAN SVGESLETGA ENIQSVQGSQ SVKLESQLPS SESKLGEIKA 
SIQAAIMDSQ QPFSGSVILL ERGKPLLELQ KGEGISKDSR FVMASLSKQI TATLILQAVD
AGKLDLTQTL NHYLVGDAKG DNKALKAVVA GTNSSANALN PGRYDERITL HQLLTHTSGV
DKLGKANRFE PGSQFEYSNL GYSLLGQVLE KVNHQSFAEQ VAQFATRYQL NGLSAELGSV
AAIHTKVPSL AVGLQESEVI APSDLVLDEA LLPAGGLIAS APAYAAFQQQ LHAGKLLSAE
SYQWMTTAHT EIQFLWPNMH YGYGVRINKD DSLIEYSHTG YLTGYMSMTL HYPEFNVNLV
MLENLSLNLN DRARVFELHN QIRQIIRSQL LLAKASNV