| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0822 |
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| Symbol | |
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| ID | 1168673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 838167 |
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| End bp | 839585 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637342796 |
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| Product | outer membrane efflux family protein |
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| Protein accession | NP_716453 |
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| Protein GI | 24372411 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATA AAGTGTTAAT GCATCAAAAC AAATTAAGAA CCCTTAAGCT CAGCGTGATT
GCCATCAGCA TTGCACTGCT GTCTGGCTGT GGCGCGCTAA TGCGCTCCGA CTTTGAGCCG
CCCGCATTGC AAGTGCCAGA GCAGTGGCAG CATACCGCGG TCAATAGCCA AGTCAGTCTC
GACCCTTGGT GGCAAAAATT CAATCAACCA GAATTGAATC AACTTATTAG CCAAGTGCTT
AGCAGCAATA ATGATCTGAC TATTGCGACC TTAACCTTGC AAAAGGCGCG TTTACAGGCG
GGGTTAGCAC GGGATGAGCT GTATCCTCAG CTCAGCTCTA ATAATGCGGC GTCGGTGAAT
AAACCGCTGG AGGGTGGCAG TTCGAGCAAG GCGTACAAGG CAAACCTATC GGTAAGCTAT
GAGGTGGATC TCTGGGGCAA AGTGTCGGCC AATATCGATC AAGCCCAGTG GACGGCGCTG
GCAAGCGTTG AGGATCGAGA GAGCACTGCG CATAGTCTCG TCGCGACGAC GGCCTCGCTC
TATTGGCAGA TTGGTTATCT GCATCAACGC ATTGAGCTTA GCAATAAAAG TATTGAATAC
AGTCGGCAAA CGCTGGCATT AACCGAGCGC CAATATGCCT CGGGCGCGGT GACTGAGTTG
AATGTGCTCG AGTCCCTGCG TAGTCTTGCG GGGCAAGAGG CCGCCCACAG TCAATTGCTG
CAACAGTTGG TTGAAGCCGA AAATGCCCTC GCGATCTTAC TCAATCGCGC CCCGGGGCAA
GTGGCGGTTG AGATCAAACA ACTGCCGGAC AGTGCGGTAC CTGAGATTGG CGTTGGCATT
CCCGCCGACT TGATCGGCCG TCGTCCCGAT GTGAAGGCGG CGTTGTATCA ATTGCGCTCT
GCGCTTGCCA GTAAGAATGC GACTTACGCA AGTTACTTCC CAAGTTTGAG TTTGACCGGC
AGCGTGGGTG AGTCGACCTC CGAGCTAAAA GAGCTGTTGC GTAACCCCGT CGGTAGCTTA
GGCGCAGGTT TAATGCTGCC CTTTTTGCAA TGGAATCAAA TGCAAATCAA CAATGATCTT
GCCGATATCG ACTACCAAAC GGCGATTGTG AATTACCGTA AAACCCTCTA CAGCGCCTTT
GAAGATGTGG ATAACGCCAT CTCGGCAAAG CAGCAATACG CCTACCAAGG TGAGAAGCTT
GAGCAGCAGT TTAGCGCCGC TGCACAGGCT GAAGCTATCT ACGAGAGCCA GTATCGACAC
GGCGCTATCG GCATTCAAAA TTGGATTGAT GCGCAGGAGA ATCGCCGCAG CGCCGAGGCC
GCATTGCTGG AGAATCGCTA TAACCAATTA ACGGCTCAAG CGACACTCTA CCAAGCCCTC
GGTGGGAGCG ATATTGCGCC GCTATTAGCG GATAACTAA
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| Protein sequence | MNNKVLMHQN KLRTLKLSVI AISIALLSGC GALMRSDFEP PALQVPEQWQ HTAVNSQVSL
DPWWQKFNQP ELNQLISQVL SSNNDLTIAT LTLQKARLQA GLARDELYPQ LSSNNAASVN
KPLEGGSSSK AYKANLSVSY EVDLWGKVSA NIDQAQWTAL ASVEDRESTA HSLVATTASL
YWQIGYLHQR IELSNKSIEY SRQTLALTER QYASGAVTEL NVLESLRSLA GQEAAHSQLL
QQLVEAENAL AILLNRAPGQ VAVEIKQLPD SAVPEIGVGI PADLIGRRPD VKAALYQLRS
ALASKNATYA SYFPSLSLTG SVGESTSELK ELLRNPVGSL GAGLMLPFLQ WNQMQINNDL
ADIDYQTAIV NYRKTLYSAF EDVDNAISAK QQYAYQGEKL EQQFSAAAQA EAIYESQYRH
GAIGIQNWID AQENRRSAEA ALLENRYNQL TAQATLYQAL GGSDIAPLLA DN
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