Gene SO_0733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0733 
Symbol 
ID1168588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp748237 
End bp748848 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content48% 
IMG OID637342713 
Productcold shock domain-contain protein 
Protein accessionNP_716366 
Protein GI24372324 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATGG ATAGAGGTGT GTTAGTTCGC TGGAACGAGG AAAAGGGATT TGGCTTTATT 
CAGCCGGAAC AAAGCGGCGC TCGCGATGTG TTTATTCACA TTTCCGCACT AAAAATGATG 
GCGCGAAAAC CCAAAGTGGG CGATAGCATT CTATACCATG CAGAAGTACA ACATGATGGC 
AAAATAAAAG CCGTGATGGC CTCCATTGAA GGAGTGGCAG TGCTGGCAGC AAGTCCAGTA 
TCAAAGGGAC CAACACGCAC GCCACAAACT AACCGAGCCA CCAACCTCCC CCATTCAAGT 
AAAGGTCAAA CCTCGTTCAA CCGCGTGATT TCAATCTTGT TGCTGATTGC ACTAGCGGGT 
TTTGGCTACG GCCAGTACCA GCAAAGACAA GAAACAGCTA TTGACGTAAA CCAAGATCCC 
GCCGAAGTAT TACAACAGCA AAACTCACTC GAGGTGCAAT TCCAGTGTGA AACGGGCAAA 
ACCCATTGCA GCCATATGCG CTCCTGTGCC GAAGCGACCT TTTACATTCA AAATTGTCCC 
AACACGCAAA TGGATGGCGA CGACGATGGC ATCCCTTGTG AAAGCCAATG GTGTAGCTCA 
TCCATGTTGT AA
 
Protein sequence
MLMDRGVLVR WNEEKGFGFI QPEQSGARDV FIHISALKMM ARKPKVGDSI LYHAEVQHDG 
KIKAVMASIE GVAVLAASPV SKGPTRTPQT NRATNLPHSS KGQTSFNRVI SILLLIALAG 
FGYGQYQQRQ ETAIDVNQDP AEVLQQQNSL EVQFQCETGK THCSHMRSCA EATFYIQNCP 
NTQMDGDDDG IPCESQWCSS SML