Gene SO_0675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0675 
Symbol 
ID1168536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp693403 
End bp694323 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content50% 
IMG OID637342661 
Productprophage MuSo1, major head subunit, putative 
Protein accessionNP_716308 
Protein GI24372266 
COG category[R] General function prediction only 
COG ID[COG4397] Mu-like prophage major head subunit gpT 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCGA TTAATGCTGC AGTATTACAA GCCCTGCGCA CTATGGTGCG TAGCGAGTTT 
CAAAATGCTT TGACCAAGAC TGAGCCACTG TATTTAAAAA TTGCCTCAGT CGTGCCAAGC 
AATACTAAGT CCAATACCTA TGGCTGGTTA GGCTCGATGC CGACTATGCG GGAGTGGATT 
GGTGCCCGTG TGATCAACTC CATCAAGGAG CATGGTTACT CAATCACTAA CCGTACCTTT 
GAAACCACCA TTGGGATCTG CCGCGATGAT GTAGAAGACG AGGTTATCGG TACCTATAAG 
CCTATGGTGC AAGCCTTAGC GCAGGAAGGT GAAGAGTTTC CCGACGATTT GGTGTTCGAG 
CTATTAGCCG ATGGTTTTAG CACTTTGTGT TACGACGGGC AGAACTTTTT TGATACAGAC 
CATCCCGTTA ACGAAAAGCA CGATGGCACT GGGGACAATG TTTCAGTGGC CAATATGGCC 
CTAGATGCGG CCTATACGGG TGAGCCTTGG TTCCTACTCG ATACTACCCG CCCACTTAAG 
CCTGTGATCT TCCAGGAGCG CCGCAAGCTG GATTTAAACA CCTTGTTTAA CCCTACTGAT 
CCAGCGGTAT GGACTAACAA CGAGTTCCAG TTCGGTACCG ATATGCGCTG TGAAGCAGGC 
TTTGGCTTCT GGCAAATGGC CTTTGCCAAC AAGCGCGCCC TCAACGCAGA CAACCTGTGG 
GACACCATCG AGAAGATGAA AGCCTTCAAA CGTGATGGCG GTAAGAAGCT CAAGATCCGT 
CCAAGTCTGT TGGTTGTTCC AAGTTCGTTG GAACAGGCCG CCACTAAGTT ACTTACCAGA 
GAGCTTATCG ATGAGAACGG CACCACGGTG GAGAACGAGC TGAAAGGCAA GGTCGAGCTG 
TTAGTGGTTC CGCAGTTGTA A
 
Protein sequence
MAAINAAVLQ ALRTMVRSEF QNALTKTEPL YLKIASVVPS NTKSNTYGWL GSMPTMREWI 
GARVINSIKE HGYSITNRTF ETTIGICRDD VEDEVIGTYK PMVQALAQEG EEFPDDLVFE 
LLADGFSTLC YDGQNFFDTD HPVNEKHDGT GDNVSVANMA LDAAYTGEPW FLLDTTRPLK 
PVIFQERRKL DLNTLFNPTD PAVWTNNEFQ FGTDMRCEAG FGFWQMAFAN KRALNADNLW 
DTIEKMKAFK RDGGKKLKIR PSLLVVPSSL EQAATKLLTR ELIDENGTTV ENELKGKVEL 
LVVPQL