Gene SO_0618 details

Gene Information

• Locus tag: SO_0618
• Symbol: astA
• ID: 1168484
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 644797
• End bp: 645816
• Gene Length: 1020 bp
• Protein Length: 339 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637342609
• Product: arginine N-succinyltransferase
• Protein accession: NP_716251
• Protein GI: 24372209
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG3138] Arginine/ornithine N-succinyltransferase beta subunit
• TIGRFAM ID: [TIGR03243] arginine and ornithine succinyltransferase subunits; [TIGR03244] arginine N-succinyltransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAATCA TACGTCCCAT TCGGGCAGGC GATTTTGAAT CTCTATACCA AATTGCCGAA 
GAATCAGGCC ATGGCTTTAC CTCATTGCCA GTCAATGCCG ATTTACTTCG ACATAAAATT 
GCCCGTGCCG AAGCCTCTTT TGTCAAAGTT GTCGATAAGC CCTTCGATGA AGGCTATTTG 
ATGGTGCTTG AAGATACCGA AACCCGCGAA GTTGTTGGCA CCTGCGCCAT TGAGGCGGCT 
GTCGGTATGG AGGATGCCTT CTACCATTAT CGCCTTGGCA CCGAAGTGTA CTATTCCGAA 
CAAATTGAAG TGCGTAATGA GGTTGAAACC TTAACCCTTT GTCACGATTA CACAGGTGCC 
GCTGAGCTTT GTACCCTGTT TTTACGGGAA CCCTATCGTA AGGGGAATAA TGGCCGCATG 
TTGTCCCGCA GCCGTTTTCT GTTTTTAGCT CAACATGCAA AGCGTTTTGG CGAGACTGTG 
ATTGCTGAAA TGCGTGGTGT GAGCGATGCC GATGGTCATT CTCCCTTCTA TGGTTGGCTG 
CAAAAAAACT TCTTAGGTAT TGATTTTGTT CAGGCGGACT ACCTTTCTGG CTTAGGCAAA 
AAAGCTTTTA TGGCGGAGAT GATGCCCCGT AACCCTGTGT ATGTTTGCCT ACTGCCAGAA 
GAAGCACAGA AAGTGATCGG CGAAGTGCAT ACCAATACGC GTCCCGCCTT AAGCCTGCTG 
CAAGCCGAAG GCTTCAGGTG CCGTGGTTAT GTGGATATTT TCGATGGTGG ACCAACGGTG 
GAATGCCGCT TAACCGATAT CCGCGCCGTG CGTGAAAGCC GTCTGCTGAC GGTCGATATT 
GGTGATATGC CTGAATCTGA TAAGCAATTT ATTGTCTCTA ACACCCAATT GGCCAATTAC 
AGGGCGACTT CAGCTTATCT TTGCATCGAG GAAAAAGCCG ACCAGGTCGT GATTAGCGCA 
GAACTCGCCG AGGAGTTATT ACTCGTAAAA GGCGATCAAA TCCGTATTTT GGCAATGTAG 

 

Protein sequence

MLIIRPIRAG DFESLYQIAE ESGHGFTSLP VNADLLRHKI ARAEASFVKV VDKPFDEGYL 
MVLEDTETRE VVGTCAIEAA VGMEDAFYHY RLGTEVYYSE QIEVRNEVET LTLCHDYTGA 
AELCTLFLRE PYRKGNNGRM LSRSRFLFLA QHAKRFGETV IAEMRGVSDA DGHSPFYGWL 
QKNFLGIDFV QADYLSGLGK KAFMAEMMPR NPVYVCLLPE EAQKVIGEVH TNTRPALSLL 
QAEGFRCRGY VDIFDGGPTV ECRLTDIRAV RESRLLTVDI GDMPESDKQF IVSNTQLANY 
RATSAYLCIE EKADQVVISA ELAEELLLVK GDQIRILAM