| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0518 |
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| Symbol | |
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| ID | 1168388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 539029 |
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| End bp | 540387 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637342512 |
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| Product | outer membrane efflux family protein, putative |
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| Protein accession | NP_716154 |
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| Protein GI | 24372112 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA CCATTATCGC CCAAACACTG TTTGGTTTGT TGAGCACGCT AGTGCTCGCT
GCTGGACAGG TTTCCCAGGT TGTTGCAGCA AATTCAGTTT TACCAGCCCA AGCACCAATG
GCTGTTGGCC CTTTATTGGC CGAAGGCGAC CCATTCACCC CAGACACTCA AGCCTCACTT
AATCAGTGGT TGCCTGAGTT ACTCAAACAA ATTAATCAGT TGCCGGAGGT CCAAGCACAA
ATTGCTCGGC AGCAACAGGC AGAGCTTGCC ATTGCGGCGG CGGATCGCGC CGTTTATAAC
CCTGAGCTTG GACTCAATTA CCAAAATTCG GAAACCGATA CCTACACCGT TGGCTTGAGC
CAGACCTTAG ATTGGGGAGA TAAGCGCGGC GTGGCAACTC GCCTTGCACA ACTTGAAGCC
CAAATTCTGT TAGCGGACAT TCGCTTAGAG CGTAGCCAAA TGTTGGCTGA GCGTTTATTG
GCATTAGCCG AGCAGGCGCA AGGCCAAAAG GCACTGACCT TTGCAGAGCA GCAATTAAGG
TTCACTCAAG CACAGCTCAA TATTGCCGAG CAGCGTTTTG CAGCGGGAGA TTTATCCGAT
GTTGAGTTGC AACTGCTTAA ACTCGAACTG GCAAGCAATA CCGCCGACTA TGCCTTAGCC
GAACAAGCAG CCTTAGTCGC CGAAGGTAAA GTGATTGAGT TACTTGGGGT TGATAAGCTC
AAGTTTAGGG AGTTTATCTC TGAAATTGGC CAATTTGTGT CGATGATTTC ACCCAAGGCG
GAATTACCTG CATTAACCAG TGCCCATCAA CAGGTGTTGT TGGCTAAGGC GAATGCCTTG
AAGGTCAAGG CGGATACGGC GGCCGATCCC ACCATCAACC TTGGCCTCGA ACGGGAAGGC
ACTGACAACA AGCTCGGCAT TGGTGTGGCT ATTCCCTTGC AGGTTCGTAA TAACTACAGT
GAGTTACAGT CTGCTGCCGA CAAAGGCATC GCCATCGCGG AGCAAAACTA CCTTGCCCGT
GAGCGAGTGC TAACGGCCAA ACAGGCACAA TTTAACAATG CCTTACCCCG CTTATTAGCA
CGTTATCAAG ATTGGCGTGA GCGAGTTGAA GCCTCAGGAA GTAAAGCGGC TAAATCCTTA
AGTGAACAGT GGCGTTCGGG TGATGTGAGT ACCAGTGAGT ATTTACAAAG TCGGCGTCAG
CTTGCGGCCA GTTATTTGGT GGGTTTAAAC CTCGAAACGG CGATTTATCA GAGCTGGTTA
ACCTGGATGG GGGACAGCGG TCAACTGCAG CCTTTTATTG ACAGCTTTCC ATCCACTTCA
ACCACTAACG CCGTGCCAGC AAAGTCAATC GTGAGGTAA
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| Protein sequence | MKKTIIAQTL FGLLSTLVLA AGQVSQVVAA NSVLPAQAPM AVGPLLAEGD PFTPDTQASL
NQWLPELLKQ INQLPEVQAQ IARQQQAELA IAAADRAVYN PELGLNYQNS ETDTYTVGLS
QTLDWGDKRG VATRLAQLEA QILLADIRLE RSQMLAERLL ALAEQAQGQK ALTFAEQQLR
FTQAQLNIAE QRFAAGDLSD VELQLLKLEL ASNTADYALA EQAALVAEGK VIELLGVDKL
KFREFISEIG QFVSMISPKA ELPALTSAHQ QVLLAKANAL KVKADTAADP TINLGLEREG
TDNKLGIGVA IPLQVRNNYS ELQSAADKGI AIAEQNYLAR ERVLTAKQAQ FNNALPRLLA
RYQDWRERVE ASGSKAAKSL SEQWRSGDVS TSEYLQSRRQ LAASYLVGLN LETAIYQSWL
TWMGDSGQLQ PFIDSFPSTS TTNAVPAKSI VR
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