Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0404 |
Symbol | |
ID | 1168281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 418203 |
End bp | 421661 |
Gene Length | 3459 bp |
Protein Length | 1152 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637342406 |
Product | hypothetical protein |
Protein accession | NP_716042 |
Protein GI | 24372000 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGT CAATGGTATG TCTGGCGATC ACCAGCGCAC TGACCCTTGT GGGGTGTGGT GCCGGCGATG AGCCTTATAA AGAACTCCCG AAAGATGAAA AGCAAGTCAC CACTGCTGAC ATCGATAAAG CAACTGAGCG GCAGTATCTC TACATTCGCA GCGTGGGTAA GGCTCCGCGT TATGCCGCTG AGGTGCGAGG TTTTACTCAA GGTGATCCTA AGTTGGTGAC CTTGCATAAA ACTGAGAATG GCATCCAAGT ACGTCAAATT GATCGAGATA ATATCGGATT AGGTCATGAC AGTCGTTATC CTAATGAGTA TAACCAAGCG CCAGTATTAA CCATTCCCGG CGAATATATC GATTTTAAAT GTACCGAAGA CAAATGGCGT GAGTGTATTA ACGTGGAGCA AGTTAATACC GATGCTAATT TAACATGGCA GAATAAACGT TACTTTGTCC CTGATTTTGC CAAAGCTAAA ATTGCCGAGT TGGGCATTAA TGACATATTT ACCTTTGGGG AATGCGTTAC TGAAACCGAA GCGCCGCGTT TAGTGAATAC TCAAGGCCAA AAAGGCTATG AGATGGATTT AGCCAAGGGC GTGGTTAACT TTGAAATTGA GCATACCTAT CAAGCTTCAC CAAGTTGCTT TAACCAATTT TACGGTGGCA ATCTCGACAA TTTATCCTTT ACGACCACTG AGTTTATTTC GATTGTGGCG GTGGATCAGT TAGCCAGTAA AGACTATCAA GCGATTCCTT ATGCCGAAAA CGAAAAGGGC GCATTTGGTT TCTTTACCTC CTCCCATACC TATCGTGATG CGACTGACTC AGAGGGCGTT GACGGGTATG TGCGAACTTA CTTGAATCGC TTTAATCCGG CCAAATCGGA ACTGACTTAT TACCTGAGTA ATAATTTCTA CGATGCGAAA AATAAACCCT TTTTGGATGC TGCCATTGAG TCTGTTACGG CAATTAACAT TCAAAACAAG TTGTATAAAA CCGGTTTTCC ACAGATAAAA CTTGAGCAAG CCAACGATAA ACGCCATGGC GACCTACGTT ATAGCAACAT CACTTTATTC GATGAGCCTC TGGATAATGG CCTGGCGGGT TATGGTCCAT CAGCGGCAAA CCCGCTAACA GGTGAAATTG TTAGTGCGCG AGTCAATCAA TACAGCTCGA ATCTAAAACA AGGCGCCGTT CGTTACTATC GTCAAGTGCG TTTAGATTAT AACAGAGGCA AATTGGACGC GAATTCAGTC ACATCGTTAA CGGGCGAGCC TTATGTATCG AATTTGAACA AGCCAGATGT CAGCCTCGAT ACCGCGCCTG TTGAGGCGGC AGCATTTGAG CAACCCACTC AGCAACTCAT TGCTGCACCC AAATCGCTGT TATTAACGCC CAAGGATAAT AGCTTCGATG CCTTAGCGGA TTTTGACGAA AAAACACAAG CGTTTTGGTC TGAAAACTCA ATGATGCATG TCGATACCGT GTTTGCTACA GGTGGTAGTG ATCGTGAATT ACCACGCGGT ATCAAAGGTC ATGAAATTGA CTGGAAAAAA GCCGACATGT GGGTTGATGG CAAAGTGGGC GGTAAGTTAG CGGCATTTGA AGATCTGCCC ATAAGTTTAC AAGACACCTT AACAACAGCC CTAGCTGCAC AAGCATTTGC TGGCACCTTG ACCCATGAGT TAGGACATAC TTTTGGCTTA AGGCATAACT TTGCAGGGAG TCGCGACCAC GACAATACCT TTAACCAAGC ACAACTGAAG GAGTTAAAAG CCGCCTTTAG CGATGCAGGT TACCCAGACA TTACTGTTAA TGCCGAGTTT TCGAGCCAAA TGGATTATAA CGTGAATCGG TTTGCGACCA CGTTTGAACC CTATGACTTA GCTGCATTAC GTTTTGGCTA TGCCCGTGAA GTAGAAACGA AGACCAATGA ATTTGTGTCG CTCAAAGCGG AAGATGCTAA GCGTCGTGAC GAACTTGCCA AAGGCGTCGT TAACGGTGAT ACCCGATTTG GCGCGCTTTA TAACATCGAG CAAAACAATA GCCTACGTCA GTATTCTTTC TGTACTGATG AGCACGTGTC CCTTAACAGC AACTGTAATC GTGGAGATGC GGGCAAAAAC TTGGATGATA TTGGTCAGTT TTATATCGAA AAGTATTTCG ATAGCTACGA GACCATGAAC CTACGCCATA ATCGTCAATC TTTGTTTGAA GATCATAGCC TAAGTTACGC TATTAATCGT AAAGCTCAGT TTGATGAAAT ACGTCAATTC ATTGAAGATG TGAGCTTTTT AGAGCAATTA TTTGGTCTAT CTGAAAACTT TTTCGCTGGT GAATGCGAAC GATTGGCGGC GGCAGGTAGC GAGGCTTGGT ATTGCGCGAA TCAGCGGGCG ATGAATCAGT CGGCAGATTT CTTCCTCAAG CTGGTTGGAG AAAATGATGC GACCCTCGAT GTGACATACA AGCAAGCCGA TGGCAGCGTT GCGTTAAGGC AACAGTACAA TTTTGCTAAG GTACTTGAGC AATATCGTTT TAAAAGCGGC GATATGAAGG CGCAATTTGA GCCAGGTGAG GTGATCAGTC AGTTCTCTGA TTCTCCTGAA GCCTTGAAAG AGTTGATCAT TAAATCGCAA ATCAATCCTA AATTTCAGGA TTTATTAACG GCGGATGTTA GCTTTTCGGG TCGCTTACTC AACGGCATTA AAACGCCAGC ATCTTCACCT AACCACCCCT ATGTGAATGA ACGCGACGTG TTGGGAGTGT GGCCAGATAA ATTGTTAGCC GTGAGAGCCT TAGTATCACG TACCACTCCC CGTAGTACGT CAAGCCGTGG CTATAAAGCA TTGGTTGATT TACCTAATGT GGGTCCGGTG TTCCAAGACA TGCTGTGTAA AATGACCATG GGCGAAGGTC CTGGCCTGAC TCGCGGTAAT ACGCCGCTCT TTACCGAAAG CTGTGGCGTG AGTGGTAAGC TCGATAGCTA TCTGCCTTAT TACACTGATT TTGCACAACA AAGTATTGAA CCATTACCTA ATTATGACCG TTCAGTATCA CGTTACTTCC AATTTGATAC CGTTAACGGC CAACCAAAAG GTAAGAGTAA TTTACTGCAG ATGATATTAC GCCAAGTGGT GCTTGCATCC GTGGACAGTG ACTATCAAGG CGAGCAAAAA GCTAGGGTAT GGCGTGAATA CGTTGGTATT CGTTTAGCGG GTCCAGCATT GGCGACTCAA GCAGAAGTGA CGGTAAATGG CCGAGTGTAT GCTGCAACCG CAGAAAACAC TTTAGCATTG GCGCTGATTA ACCGAATTAA AGAGATGGAA ACCTTTAAGA CGCAGGCCGG TGAGGCCACG CTTGCCATCA AGTTAAACAA CGGCACAGTA GGTGAGATCA TTGACAGGCA GCTAAGTCGA GATCAGCTAG TGCTCAGTTA TTTACCTGTG CTTGATTAA
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Protein sequence | MKKSMVCLAI TSALTLVGCG AGDEPYKELP KDEKQVTTAD IDKATERQYL YIRSVGKAPR YAAEVRGFTQ GDPKLVTLHK TENGIQVRQI DRDNIGLGHD SRYPNEYNQA PVLTIPGEYI DFKCTEDKWR ECINVEQVNT DANLTWQNKR YFVPDFAKAK IAELGINDIF TFGECVTETE APRLVNTQGQ KGYEMDLAKG VVNFEIEHTY QASPSCFNQF YGGNLDNLSF TTTEFISIVA VDQLASKDYQ AIPYAENEKG AFGFFTSSHT YRDATDSEGV DGYVRTYLNR FNPAKSELTY YLSNNFYDAK NKPFLDAAIE SVTAINIQNK LYKTGFPQIK LEQANDKRHG DLRYSNITLF DEPLDNGLAG YGPSAANPLT GEIVSARVNQ YSSNLKQGAV RYYRQVRLDY NRGKLDANSV TSLTGEPYVS NLNKPDVSLD TAPVEAAAFE QPTQQLIAAP KSLLLTPKDN SFDALADFDE KTQAFWSENS MMHVDTVFAT GGSDRELPRG IKGHEIDWKK ADMWVDGKVG GKLAAFEDLP ISLQDTLTTA LAAQAFAGTL THELGHTFGL RHNFAGSRDH DNTFNQAQLK ELKAAFSDAG YPDITVNAEF SSQMDYNVNR FATTFEPYDL AALRFGYARE VETKTNEFVS LKAEDAKRRD ELAKGVVNGD TRFGALYNIE QNNSLRQYSF CTDEHVSLNS NCNRGDAGKN LDDIGQFYIE KYFDSYETMN LRHNRQSLFE DHSLSYAINR KAQFDEIRQF IEDVSFLEQL FGLSENFFAG ECERLAAAGS EAWYCANQRA MNQSADFFLK LVGENDATLD VTYKQADGSV ALRQQYNFAK VLEQYRFKSG DMKAQFEPGE VISQFSDSPE ALKELIIKSQ INPKFQDLLT ADVSFSGRLL NGIKTPASSP NHPYVNERDV LGVWPDKLLA VRALVSRTTP RSTSSRGYKA LVDLPNVGPV FQDMLCKMTM GEGPGLTRGN TPLFTESCGV SGKLDSYLPY YTDFAQQSIE PLPNYDRSVS RYFQFDTVNG QPKGKSNLLQ MILRQVVLAS VDSDYQGEQK ARVWREYVGI RLAGPALATQ AEVTVNGRVY AATAENTLAL ALINRIKEME TFKTQAGEAT LAIKLNNGTV GEIIDRQLSR DQLVLSYLPV LD
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