| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0398 |
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| Symbol | frdA |
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| ID | 1168275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 411381 |
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| End bp | 413387 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637342400 |
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| Product | fumarate reductase flavoprotein subunit |
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| Protein accession | NP_716036 |
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| Protein GI | 24371994 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACTGA TTTATACCGA TTCATTAGTG GTTGGTGCCG GATTGGCCGG GCTAAGGGTA
GCCATTGCCT CTAAAGAGCG TGGACTCGAT ACCTTAGTGC TTTCGCTTAT TCCTGCTAAA
CGTTCTCACT CTGCGGCGGC GCAAGGGGGA ATGCAGGCAA GTCTTGGCAA TGCTGTTAAA
GGCATGGGTG ATGATGAAGA CGTGCACTTC CAAGACACAG TTAAAGGATC GGACTGGGGC
TGCGATCAAG AGGTCGCCAG AATGTTTGCT CATTGTGCGC CTAAGGCGGT ACGTGAGTTA
GCCAACTGGG GTGTACCTTG GTCACGCGTC AGTGCAGGTC CAAGGGAAGT GATTGTTAAC
GCACAAAAAG TCACTCTGCA AGAAGCCGAA GAAGCCCACG GGTTGATCAA TGCTCGCGAT
TTTGGCGGCA CCAAGAAATG GCGCACCTGT TACACCGCCG ATGGTACGGG TCACTCGTTG
CTTTATGCGA TGGATAACAA AGCGATTTCA ATGGATATTC CGGTCCATGA GCGCGTCGAA
GCACTGGCGT TAATCCACGA TGGAGAGCGC TGTCATGGGG TGGTTGCTCG CTGCCTTATC
AGTGGTGAAT TGCGTGCTTA TGTGGCGAAA TCAACCACCA TCGCCACCGG CGGTTATGGC
CGCATTTACG AAGTGTCAAC CAATGCGATT ATCTGCGAAG GTATCGGTCA GGCGCTTGCG
CTCGAAACGG GCGTGGCGAC GCTTGGTAAT ATGGAAGCGG TGCAATTCCA CCCCACGGCA
ATTGTGCCAG TTGGCATTTT AACCACTGAG GGTTGCCGTG GTGATGGTGG TTTATTGCGG
GATAAAGACG GTTACCGTTT TATGCCTGAC TATGAGCCTG AAAAGAAAGA GCTAGCTTCG
CGGGACGTGG TGTCCCGCCG CATGACCGAG CATATGCGTA AAGGTAAGGG CGTCGATAGC
CCCTATGGTC CTCACTTGTG GCTGGATATT ACCTTGCTTG GGCGCAAACA TATCGAAACC
AACCTGCGTG AAGTGCAAGA GATTTGTGAA AATTTCCTCG GTATCGATCC TGCAAAGGAT
TGGATCCCCG TGCGTCCAAC CCAGCATTAT TCTATGGGTG GCATTCGCAC CAAAGCAACC
GGTGAAAGTC CGCAGCTTAA GGGTTTGTTT AGTGTAGGTG AAGCCGCCTG TTGGGATATG
CATGGCTTTA ACCGCTTAGG TGGTAACTCG CTCGCCGAAA CCGTAGTGGG CGGCATGATT
ATCGGCAAGT ATATCGCTGA TTTTTGTGAA AATAACAGCC TTGAGATCAA CACAACACTT
GCCGAGCAGT TTATGCGGCA GGTGCAGACT GAAATCGACA CCTTAGTCGA TGGCGATGGT
CACGAAAGCC CCTTCGAGCT TAAGCACGCA ATGCAGCGGA TTATGATGGA TTACGTAGGG
ATTTTCCGTA ATGGGCCTGA ACTCGATAAA GCGGTGACTG AGCTTAAAGC CTTGCTTGAG
CGTTCACGCA AGCTCGGCAT TAAGTGCAAA AAACGCCACG CCAATCCAGA GTTGGTGGAG
GCGCTGCGGG TTAAGCGTAT GCTCAAAGTC GCGCTGACTG TTGCTTGCGG CGCTGCTGCT
CGCACCGAAA GCCGTGGTGC CCATGCCCGT GAAGATTATC CGCAGCGTAA CGACCGCGAT
TGGCTTAATC GCACCCTCGC CAGTTGGCCC GATGCTAATG CGTTAGAACC CGTTTTAAGC
TACGAGCCGC TGGATGTGAT GAAGATGGAG TTGCCACCGG GATACCGTGG TTATGGTATC
GACAATGCCA TTGCTCACCC TGATACCGCT AAACGTGAGC AACAAATTGC GCAGATTTTG
GCAGAGCTTG GGGAGGATGC CGATCGTTAT CAACGCCAAG CGGCGCTGAT GCCTTTTGAG
CTGCCGCCTA GCCTGCAAGC TAACAATGAA CGTTTAAGTG ATACCTTACA AAAACCCTCA
GCTAATGCGT TAGGAGAAAA ATCATAA
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| Protein sequence | MKLIYTDSLV VGAGLAGLRV AIASKERGLD TLVLSLIPAK RSHSAAAQGG MQASLGNAVK
GMGDDEDVHF QDTVKGSDWG CDQEVARMFA HCAPKAVREL ANWGVPWSRV SAGPREVIVN
AQKVTLQEAE EAHGLINARD FGGTKKWRTC YTADGTGHSL LYAMDNKAIS MDIPVHERVE
ALALIHDGER CHGVVARCLI SGELRAYVAK STTIATGGYG RIYEVSTNAI ICEGIGQALA
LETGVATLGN MEAVQFHPTA IVPVGILTTE GCRGDGGLLR DKDGYRFMPD YEPEKKELAS
RDVVSRRMTE HMRKGKGVDS PYGPHLWLDI TLLGRKHIET NLREVQEICE NFLGIDPAKD
WIPVRPTQHY SMGGIRTKAT GESPQLKGLF SVGEAACWDM HGFNRLGGNS LAETVVGGMI
IGKYIADFCE NNSLEINTTL AEQFMRQVQT EIDTLVDGDG HESPFELKHA MQRIMMDYVG
IFRNGPELDK AVTELKALLE RSRKLGIKCK KRHANPELVE ALRVKRMLKV ALTVACGAAA
RTESRGAHAR EDYPQRNDRD WLNRTLASWP DANALEPVLS YEPLDVMKME LPPGYRGYGI
DNAIAHPDTA KREQQIAQIL AELGEDADRY QRQAALMPFE LPPSLQANNE RLSDTLQKPS
ANALGEKS
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