Gene SO_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0259 
SymbolccmE 
ID1168143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp260541 
End bp261026 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content47% 
IMG OID637342267 
Productcytochrome c-type biogenesis protein CcmE 
Protein accessionNP_715899 
Protein GI24371857 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2332] Cytochrome c-type biogenesis protein CcmE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCCAA GACGCAAAAA GAGACTGACA TTAGCTGTAG CATTAATCGG TGGCGTTGCC 
GCAATTGCTT CACTTTTGTT GTATGCGCTG AACTCCAACT TAAACCTATT TTATACACCG 
TCTGAGATTG TTAACGGCAA AACCGATACT GGTGTAAAAC CCGAAGCAGG CCAACGTATT 
CGTGTGGGCG GCATGGTAAC TGTTGGCTCT ATGGTGCGTG ATCCAAACAG CCTACACGTG 
CAGTTTGCTG TACACGATTC CTTAGGTGGC GAAATTCTAG TGACCTATGA TGATCTATTA 
CCGGATCTAT TTCGTGAGGG CCAAGGTATC GTGGCACAAG GCGTATTAGG TGAAGATGGT 
AAGTTGGCCG CGACTGAAGT CTTAGCCAAG CATGACGAAA ACTATATGCC ACCTGAAGTT 
GCCGAGGCTA TGGGCCAAAA GCATGAGAAA CTTGATTACA GCCAACAGAA ATCGGCAACT 
CAATAA
 
Protein sequence
MNPRRKKRLT LAVALIGGVA AIASLLLYAL NSNLNLFYTP SEIVNGKTDT GVKPEAGQRI 
RVGGMVTVGS MVRDPNSLHV QFAVHDSLGG EILVTYDDLL PDLFREGQGI VAQGVLGEDG 
KLAATEVLAK HDENYMPPEV AEAMGQKHEK LDYSQQKSAT Q