Gene SO_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0184 
Symbol 
ID1168070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp188405 
End bp188956 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content49% 
IMG OID637342186 
Productmicrocystin dependent protein 
Protein accessionNP_715826 
Protein GI24371784 
COG category[S] Function unknown 
COG ID[COG4675] Microcystin-dependent protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCAT TTTTGAGTGA GATTAGAATG TTTAGTTTTG AGTGGGCACC CAAAGGTTGG 
GCGAAGTGCG ATGGCAGCTT GATGTCTATT GCACAAAATA ATGCGCTATT TGCCTTACTC 
GGTGTGCAGT TCGGAGGCAA TGGTACAACT ACCTTCGCAC TGCCGGATTT ACGTGGCCGC 
GCGCCAGTGC ATGTGGGTGT TAGCGATCGA AATTCACCAA GCTATTCAAC TTTTAAAATA 
GGCGCCGTGG GTGGAACCGA AAATGTGTCC CTAACACAAT CACAAATGCC CGCACACAAT 
CACCTAGTGG CAGCATCAAC CGTTTCTGGC ACAGTTAAAC CTTTGGCTAA CGATATTATT 
GGTGCAGGTC TCAACAAACA AAACGGGCAA CCTTCACACG TTTATGCTCC ATATAATCCT 
GCTACTCAGG TTCCATTAGC TACCGATGTT GTCAGCGTAC AGGGCGCGGG CGCGGCTCAC 
CAAAACTGCC AGCCATCACT GGCGATAAAT TTCTGTATTG CCGTGCAAGG CATATTCCCT 
TCGCGCAACT AG
 
Protein sequence
MEPFLSEIRM FSFEWAPKGW AKCDGSLMSI AQNNALFALL GVQFGGNGTT TFALPDLRGR 
APVHVGVSDR NSPSYSTFKI GAVGGTENVS LTQSQMPAHN HLVAASTVSG TVKPLANDII 
GAGLNKQNGQ PSHVYAPYNP ATQVPLATDV VSVQGAGAAH QNCQPSLAIN FCIAVQGIFP 
SRN