Gene SO_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0122 
Symbol 
ID1168018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp131702 
End bp132325 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content47% 
IMG OID637342134 
Productamino acid transporter LysE 
Protein accessionNP_715764 
Protein GI24371722 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACTG AAACTTGGCT ACTCTATTTT TTTGCAATTG TATTGATTGG GATTTCCCCC 
GGACCGATTG CGATGTTGTC GATGTCCCAC GGTATACATT TTGGTAAAAA ACGCAGTATT 
GCCACCGGAC TTGGCAGTGT CAGCGCCGCA CTGATCTTAA TGGCGGCCTC GGCTGCAGGT 
TTAGGTGCGA TTATCAGCGC CTCAGAATAC GGCTTTACCA TACTCAAATG GTGTGGCGCC 
GCCTATCTGG TGTTTTTGGG CATCAAATTA TTGCTAACAA AACAGCAAGG GCAAACGCTA 
GAAGTCGTTA AAACAGAAGG GAAAGGCACA CTTAAGCAAC TCTTTAAACA AGCATTTTTA 
GTTGGGATCA GCAATCCCAA AGACTTGCTG TTTTTTGCAG CTTTATTCCC ACAATTTATC 
GATTTAACCG CGCCACAATT ACCGCAATTG ACGATACTTG CCCTGACTTG GGCGCTCGTC 
GACTTTAGCT TTGTGATGAT CTACGCCTCA ATGGCAAATG TGCTGGCTCC TAGTCTTAAG 
GCCAGCAACA AATTGCATTG GTTTGACCGC ACCAGCGGCG GCGTGTTTCT CACCCTCGCC 
GCGATTCTAG TCAGTCGAGA CTAA
 
Protein sequence
MQTETWLLYF FAIVLIGISP GPIAMLSMSH GIHFGKKRSI ATGLGSVSAA LILMAASAAG 
LGAIISASEY GFTILKWCGA AYLVFLGIKL LLTKQQGQTL EVVKTEGKGT LKQLFKQAFL 
VGISNPKDLL FFAALFPQFI DLTAPQLPQL TILALTWALV DFSFVMIYAS MANVLAPSLK 
ASNKLHWFDR TSGGVFLTLA AILVSRD