Gene SNSL254_pSN254_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0189 
SymboltraG 
ID4929556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand
Start bp167822 
End bp171436 
Gene Length3615 bp 
Protein Length1204 aa 
Translation table11 
GC content51% 
IMG OID642572486 
Producttype IV conjugative transfer system protein TraG 
Protein accessionYP_001102061 
Protein GI134047246 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0000111366 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGATCTT TTTCAATCCA CTCTATCGGT GACTCTGCTT TTCTGGAGCA AATCCTGATT 
GCAGTATCAA TGATCACCGG CACCGGGGAT TTCGAGAAGA TGGTCAGTAT TGGCCTGCTT
CTTGGGGTCT TGATGATCTG TATTCAGTCC GTCTTTCAGG GCGCAAAGCA AATCAACCTC
CAGCAAGTGC TGGTAGGTTG GATTCTATAT GCCTGTTTCT TCGGCCCAAC CACAACTGTG
ACTATCGAGG ACGCTTATAC AGGGCAGGTT CGAGTCGTCG CCAATGTCCC TATTGGGGTA
GGCTTTGCTG GAGGTGTCAT ATCCAACGTG GGATACACCA TCACCAATTT GTTTGAAACT
GGATATGGGG TAATCGTACC CAATGTCACG GAAAGCCACT TTTCCGAAAC ACTGAAACTG
TTGAATGACG TCAGACGGCG AGCCTATGAC ACAGGAGTTT TTACTGCGCT TAACTCAGCA
AATGGAGGCG GCTATGTTGA CGTGAGGCGT TCCTGGAACA ATTACATTCG GGAATGCACG
TTAACCAAAG TCGATCTCAA CCTAATGTCC CTTGATGAGT TGATGAACCG TTCAACTGAC
TCAGCTTTGC GATTCAACTC ACAGCTCTAC GGAACTAGGT TGTATTTGTC TACAGCAAAC
CCTGACGGCG CTGACTACAC ATGTACTGAC GGATGGGTGG CTATTAGCAC TGCAACCGCC
AACCTAAGCA GCCCGGTTGT TGTTGATGCT CTTAACAGCC TACTGGGTAT TGACACGTCA
ACTGGAGACA ACGCTCTAAC GAAGCTGACC GATTCGCTTC AAGCGATGGG TGCCACAACT
ACGTCATCAA TCGACTATCT GAAAGCCGCC GTTCTGGAGC CCCTCTATTA TGAAGCCGCA
GCAGGACGTT ATCAGGACCT CCAGGATTAT GGCTCTGCAT TGATGGTCAA CCAGGCTATT
CAGCAACGGA ACACACAGTG GGCCGCAGAG CAGTCGATGT TCATGACCGT CGTCCGACCA
ATGCTGACGT TCTTTGAAGG CTTTATTTAT GCTATAACCC CGATCATTGC TTTTATTATC
GTGATGGGCA GCTTCGGCCT CCAGTTAGCC GGGAAATATG TACAAACCAT CCTCTGGATT
CAGCTATGGA TGCCAGTCCT CTCAATTATA AACCTGTTTG TTCATACCGC CGCGTCAAAT
GAGATGTCTA GCCTCAGTGC TGGTGGTCTC AACTCCATGT ACGCTCTTTC CTCAACTGGA
GATGTTCTGC AACACTGGAT TGCAACCGGC GGCATGTTGG CTGCGGCCAC TCCGGTGATT
TCCCTGTTTA TCGTCACAGG TAGCACCTAC GCCTTCACCA GCTTGGCATC GAGAATAAGT
GGTTCTGACC ACGTTGACGA AAAGATGCAA ACGCCAGATC TACTCAAGCA AGGTCCGGTT
ATGCAAAGTC AGCCAGCGTA CAATCACAAC CAGTTCAGTG GTGCGATTGC AAACGGCGCA
GAAAGCATGA TCAGTACCTT CTCGCTTGGC TCCACCTTGG CATCAGGCGT GAGCTCCGCA
CAGGCATTAC AAAGTCAGAA ATCGGAGGCT TTCCAAAGCA CTCTTGGTCG AGGTTTTTCT
GATGGAGTAA GTCAGGATCA AGCCTATTCA AGACTCTCCA ATGTCGGGCG CAACGTTTCG
TCGCAAAACA CAGCTCAAAG CCAATTGATC AACCAGCAAG CCAAGAACTT CATGGATAAG
TTCCAGGTGG ATGATAGCCA CTCTGATGCT GTCAAAGGTG CTTTTGCCAT GCAGGCTATG
GGCACACTCG ATGTTGACGA AGCTGCGTCC ATGCTTATGC CTATGGTTGG CAAGGCCAGG
GCAGCAATGA AGGCCGCTGC TGGTGTGAAA TCAAACAGTA CAGCCCTAGT TCCTGCTGGT
GGTAATGGCG AATCAGGCGG CGGCAGTGAT GTCCTGGACA TCAAAGCGCA AGCGAAGGGA
GCAACAGAGT CATCAACTCA AGACTCTTCA AGCTGGTCAG CGAGTGATGT GTCCCAGTTC
ATGAAGGGTG TGAGCTATTC GCAAACCGAT AGCCAGGCGT TGACAAATCA ATTAGCGCAG
GGTTTCAGCC GTTCTGGAAG CGAGTCATTC AAGCAAACCT GGGGCGATAG CTTATCCCAG
AACCTATCCA AGTCCGCTTC TGAACTGGTG TCTGCATCGG ACACCTTCAC AACAATGAGT
CAGCTCCAAA ACCAAATGGG CTCCATGACT AATACCGACT TTAAAACTCT CGGTGGTGCA
GTAGCACAAA CCCCTGCGGC CATGAACCAA CTGAATGACT ATTTCCGAAA TGCCGCGCCG
CAATCGGTTA AAGACGAGGC GGCTTCACTA CAGCAAAGAT ACCAAGCCTA CGGAATGTCT
CCTCAAGTGG CCCAGGCAGC AGCGCGAATG ACAGCAATGA CCAACTCCAA AAATTACGAA
CAGGGTAAGG AGCTTGGCGG GTATCAAGCC GCACTACAGG CGATCAATAC CGCGTCCGGT
CGCAACGGAG CATTTAGTGG TGATGCTTAC GGAAATAACG GCATTGAAGG CCCGAATGTT
CAAGGCCTAC CAGGTCAGGT TCAAGGGGCT GTAGGCAGTG GACCTAACAT CCCAACCGGA
TTCCGGGAGA ATGTGGCTGG GATGGCTGGA ACTAATCCGG CATCAGAAGC TGGGCAGTTA
CCAACGAATA GCCCCCTTGT TCAAAATGAA CATGCAGCCG GTACGTCAGC TCTTCATAAC
CAAGCACAGC AAACAGAGCG AAATGTATCT GCTCCTGAAC TGAAAAAAGC CCAAGATAAC
CTTATGAACT CGCTTCCGGA AATGTCTTGG AGCGCTTCGG CGTGGGGAGC GTGGGACAAC
TCCAGTGATT GGATGGGCCG CAGAGCTGAA CAAGCAGGTG GAGCTCTCAT TGCTGGTGGT
CAAGCTGGCG CTGATGCGTT CTCAAGAGCG ATGGATCAAA TGAGAACGAT GACACCTGAA
CAACGCGACC AATTCATCGC GGCCACTCAA CGCGGCGACC AGGCCGTGCA AGAGGAGTTT
GGCTGGGCCG GTGATGCGAT GGTCGGTATG GCTAAACTTG GCCGCAACGT CATGGGAGCT
GCTGCAAGCG GCTATGATGC AGCGAAGGAG TGGTTAACTG GTAAATCTGA TCTATCGGAA
GCCGCTAAAG GGATGAGCAT TGAGGAACGC GGCGCGTTCT ATGCAGCAGC GCTATCCTCT
GCCGCAGAAG CTGGTGGTGG AGCCGCGCAG CAGTTTATGA ACCAGTACGG TGATGAGTTC
AAAGAAACGA TGCAGTCTAT CGCTCAAAGC CGTTATGGGC TGACTGAATC CCAAGCCGCT
GTTTATGCCG AATCGTTTGA CACAAACGAA GGTCGCATGA ACCAGGCTGT TCAGAATCTG
AAAATGGAGT ATGCAGAACG TAACCCGGAT GGCTCACCGA TGATGCAAGG AGGTCAGCCT
GTTCTTTCTC AGCAAAACGA AGAGTTTACG GACAAGCTGG TAAACGTATT GCAGAACTCG
ACGGAAGCTG GAGACCGTTC AGGTAGCTAT TTGACTGCCG TCAGGGGGTA CAACATAGCA
AATCAAAGGT TCTAA
 
Protein sequence
MGSFSIHSIG DSAFLEQILI AVSMITGTGD FEKMVSIGLL LGVLMICIQS VFQGAKQINL 
QQVLVGWILY ACFFGPTTTV TIEDAYTGQV RVVANVPIGV GFAGGVISNV GYTITNLFET
GYGVIVPNVT ESHFSETLKL LNDVRRRAYD TGVFTALNSA NGGGYVDVRR SWNNYIRECT
LTKVDLNLMS LDELMNRSTD SALRFNSQLY GTRLYLSTAN PDGADYTCTD GWVAISTATA
NLSSPVVVDA LNSLLGIDTS TGDNALTKLT DSLQAMGATT TSSIDYLKAA VLEPLYYEAA
AGRYQDLQDY GSALMVNQAI QQRNTQWAAE QSMFMTVVRP MLTFFEGFIY AITPIIAFII
VMGSFGLQLA GKYVQTILWI QLWMPVLSII NLFVHTAASN EMSSLSAGGL NSMYALSSTG
DVLQHWIATG GMLAAATPVI SLFIVTGSTY AFTSLASRIS GSDHVDEKMQ TPDLLKQGPV
MQSQPAYNHN QFSGAIANGA ESMISTFSLG STLASGVSSA QALQSQKSEA FQSTLGRGFS
DGVSQDQAYS RLSNVGRNVS SQNTAQSQLI NQQAKNFMDK FQVDDSHSDA VKGAFAMQAM
GTLDVDEAAS MLMPMVGKAR AAMKAAAGVK SNSTALVPAG GNGESGGGSD VLDIKAQAKG
ATESSTQDSS SWSASDVSQF MKGVSYSQTD SQALTNQLAQ GFSRSGSESF KQTWGDSLSQ
NLSKSASELV SASDTFTTMS QLQNQMGSMT NTDFKTLGGA VAQTPAAMNQ LNDYFRNAAP
QSVKDEAASL QQRYQAYGMS PQVAQAAARM TAMTNSKNYE QGKELGGYQA ALQAINTASG
RNGAFSGDAY GNNGIEGPNV QGLPGQVQGA VGSGPNIPTG FRENVAGMAG TNPASEAGQL
PTNSPLVQNE HAAGTSALHN QAQQTERNVS APELKKAQDN LMNSLPEMSW SASAWGAWDN
SSDWMGRRAE QAGGALIAGG QAGADAFSRA MDQMRTMTPE QRDQFIAATQ RGDQAVQEEF
GWAGDAMVGM AKLGRNVMGA AASGYDAAKE WLTGKSDLSE AAKGMSIEER GAFYAAALSS
AAEAGGGAAQ QFMNQYGDEF KETMQSIAQS RYGLTESQAA VYAESFDTNE GRMNQAVQNL
KMEYAERNPD GSPMMQGGQP VLSQQNEEFT DKLVNVLQNS TEAGDRSGSY LTAVRGYNIA
NQRF