Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_pSN254_0161 |
Symbol | urf2 |
ID | 4929373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_009140 |
Strand | - |
Start bp | 143008 |
End bp | 143997 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642572458 |
Product | EAL domain-containing protein Urf2 |
Protein accession | YP_001102033 |
Protein GI | 134047143 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.127293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTT CCCAGCCAAT TGAATGGACA GTGGCGCAAC TGGCGCAGGC GGTCGAGCGC GGGCAGCTTG AGCTGCACTA CCAGCCGATT GTCGATTTGC GCAGTGAGCA GATTGTCGGC GCGGAAGCCC TGTTGCGCTG GCGTCATCCG ACGCTCGGAC TGTTGCCGCC GGGCCAGTTC CTGCCCGTGA TCGAATCGTC CGGCCTGATG CCGGAAATCG GCGCATGGGT GCTGGGCGCA GCCTGCCGTC AAATGCGCGA CTGGCGGGTG CTGGCATGGC AACCGTTCCG GCTGGCCGTC AATGTTTCGG CGAGCCAAGT GGGGCCAGAT TTCGACAAGT GGGTAAAGGG CGTGCTGGCC GATGCCGGGT TGCCCGCCGC GTATCTTGAA ATTGAGCTGA CCGAATCGGT TGCGTTCGGT GATCCGGCGA TCTTCCCCGC CCTGGAAGCT TTGCGACAGA TCGGTGTGCG CTTCGCCGCC GACGACTTCG GCACCGGCTA TTCCTGCCTG CAACACCTGA AATGCTGCCC CATCAGCACG CTCAAGATCG ACCAATCGTT TGTCGCCGGA CTCGCCAACG ACCACCGCGA CCAGACCATC GTGCGCACCG TGATTCAGCT TGCGCATGGG CTTGGCATGG AAGTAGTGGC CGAAGGCGTG GAAACATCGG CGAGTCTTGA TTTGTTGCGA CAAGCGGACT GCGACACAGG ACAAGGCTTC CTGTTCGCCA AGCCGATGCC GGCGGCGGCA TTCGCCGTCT TCGTCAGTCA ATGGAGGGGT GCCACCATGA ATGCAAATGA TCCGACTGCC ACCAGTTGCT GCGTGTGCTG CAAGGAAATC CCGCTCGATG CCGCCTTCAC CCCGGAAGGC GCGGAATACG TCGAGCACTT CTGCGGGCTG GAGTGCTATC AGCGCTTCCA GGCGCGCGCC AAGACCGGGA GCGAAACCGA TGCCGATCCG AACGCCTGCG ACTCATCACT GTCAGACTGA
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Protein sequence | MSASQPIEWT VAQLAQAVER GQLELHYQPI VDLRSEQIVG AEALLRWRHP TLGLLPPGQF LPVIESSGLM PEIGAWVLGA ACRQMRDWRV LAWQPFRLAV NVSASQVGPD FDKWVKGVLA DAGLPAAYLE IELTESVAFG DPAIFPALEA LRQIGVRFAA DDFGTGYSCL QHLKCCPIST LKIDQSFVAG LANDHRDQTI VRTVIQLAHG LGMEVVAEGV ETSASLDLLR QADCDTGQGF LFAKPMPAAA FAVFVSQWRG ATMNANDPTA TSCCVCCKEI PLDAAFTPEG AEYVEHFCGL ECYQRFQARA KTGSETDADP NACDSSLSD
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