| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_pSN254_0140 |
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| Symbol | insD1 |
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| ID | 4929550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009140 |
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| Strand | - |
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| Start bp | 120024 |
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| End bp | 121028 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642572439 |
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| Product | transposase InsD1 for insertion sequence IS4321R |
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| Protein accession | YP_001102014 |
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| Protein GI | 134047231 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAACA TTGCGCTTAT TGGTATCGAT CTGGGTAAGA ACTCTTTCCA TATTCATTGT
CAGGATCATC GTGGGAAGGC CGTTTACCGT AAAAAATTCA CCCGACCAAA GCTAATCGAA
TTTCTGGCGA CATGCCCGGC AACAACCATC GCGATGGAAG CCTGTGGCGG TTCTCACTTT
ATGGCACGCA AGCTGGAAGA GTTAGGGCAT TTTCCAAAGC TGATATCACC GCAATTTGTC
CGCCCATTCG TTAAAAGCAA CAAAAATGAC TTCGTTGATG CTGAAGCTAT CTGTGAAGCA
GCATCACGTC CATCTATGCG TTTCGTGCAG CCCAGAACCG AATCTCAGCA GGCAATGCGA
GCTCTGCATC GTGTCCGTGA ATCCCTGGTT CAGGATAAGG TGAAAACAAC TAATCAGATG
CATGCTTTTC TGCTGGAATT TGGTATCAGC GTTCCGCGAG GTGCTGCCGT TATTAGTCGA
CTGAGTACCC TTCTTGAGGA CAGTAGTTTG CCTCTTTATC TCAGCCAGTT ACTGCTGAAA
TTACAACAGC ATTATCACTA TCTTGTTGAG CAGATTAAAG ATCTGGAATC TCAGTTGAAA
CGAAAGTTGG ACGAAGATGA GGTTGGACAG CGCTTGCTGA GTATTCCCTG CGTTGGAACG
CTGACTGCCA GTACTATTTC AACTGAGATT GGCGACGGGA AGCAGTACGC CAGCAGCCGT
GACTTTGCGG CGGCAACAGG GCTGGTACCC CGACAGTACA GCACGGGAGG TCGGACGACA
TTGTTAGGGA TTAGCAAGCG GGGCAACAAA AAGATCCGAA CTTTGTTGGT TCAGTGTGCC
AGGGTATTCA TACAAAAACT GGAACACCAG TCTGGCAAGT TGGCCGACTG GGTCAGGGAG
TTGTTGTGTC GGAAAAGCAA CTTTGTCGTC ACCTGTGCTC TGGCAAACAA GCTGGCCAGA
ATAGCCTGGG CACTGACGGC GCGACAGCAA ACTTACGAAG CATAA
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| Protein sequence | MENIALIGID LGKNSFHIHC QDHRGKAVYR KKFTRPKLIE FLATCPATTI AMEACGGSHF
MARKLEELGH FPKLISPQFV RPFVKSNKND FVDAEAICEA ASRPSMRFVQ PRTESQQAMR
ALHRVRESLV QDKVKTTNQM HAFLLEFGIS VPRGAAVISR LSTLLEDSSL PLYLSQLLLK
LQQHYHYLVE QIKDLESQLK RKLDEDEVGQ RLLSIPCVGT LTASTISTEI GDGKQYASSR
DFAAATGLVP RQYSTGGRTT LLGISKRGNK KIRTLLVQCA RVFIQKLEHQ SGKLADWVRE
LLCRKSNFVV TCALANKLAR IAWALTARQQ TYEA
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