Gene SNSL254_A4921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4921 
Symbol 
ID6486629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4788995 
End bp4789858 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content56% 
IMG OID642740132 
Productpyruvate formate lyase activating enzyme 
Protein accessionYP_002043806 
Protein GI194442357 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACA GATGCGCTTT AGTCAGTAAG ATCATTGCGT TTTCCTGCGT CGATGGGCCA 
GGCAGCCGCC TGGCATTATT CTTACAGGGC TGCAATTTGC GCTGCAAGAA TTGCCATAAC
CCGTGGACGA TGGGACGCTG TAACGACTGC GGGGAATGCG TATCGCAGTG TCCGCATCAC
GCCCTCAGCG TTGATGGCGG GAAAGTGGTA TGGCGGTCGG ACGTCTGCGA GCAGTGCGAT
ACCTGCCTGA AAATGTGCCC ACAGCAGGCA ACGCCAATGG CGCAGACCAT GAGCGTTGAC
GATGTGCTGC GTCATATTCG TAAAGCATCG CTGTTTATTG AAGGTATTAC CGTCAGCGGC
GGAGAGGCGA CCACGCAATT ACCGTTTATT GTGGCGCTAT TTACGGCGAT CAAAGCCGAT
CCGCAGTTAC AACGGCTGAC CTGTCTGGTG GACAGTAATG GTCAGTTAAG CGAGACCGGC
TGGCAAAAAC TACTGCCGGT TTGCGACGGC GTAATGCTCG ATCTGAAAGC CTGGAAGAGC
GAGTGTCATC ACCGTCTGAC CGGACGTGAT AACACGCATA TTAAGCACAG TATCCGCTTT
CTTGCTGCGC GGGGAAAACT GGCGGAGCTG CGGTTGCTGG TTATCCCGGG TCAGGTGGAC
TATGCGGCGC ATATCGATTC ACTGGCGGCG TTTATTACTT CGCTGGGCGA GGTTCCGGTG
CGCCTGAATG CCTTTCATGC GCATGGCGTC TATGGCGAAG CGAAAGCCTG GCCAGGCGCG
ACGCCGCAAG AGGTGGAACG GCTGGCAGAC GGATTGCGCG CGCGTGGGGT GGCGAAGCTG
ATTTTGCCGG CGCTATATTT GTAA
 
Protein sequence
MNNRCALVSK IIAFSCVDGP GSRLALFLQG CNLRCKNCHN PWTMGRCNDC GECVSQCPHH 
ALSVDGGKVV WRSDVCEQCD TCLKMCPQQA TPMAQTMSVD DVLRHIRKAS LFIEGITVSG
GEATTQLPFI VALFTAIKAD PQLQRLTCLV DSNGQLSETG WQKLLPVCDG VMLDLKAWKS
ECHHRLTGRD NTHIKHSIRF LAARGKLAEL RLLVIPGQVD YAAHIDSLAA FITSLGEVPV
RLNAFHAHGV YGEAKAWPGA TPQEVERLAD GLRARGVAKL ILPALYL