| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4890 |
|---|
| Symbol | |
|---|
| ID | 6483751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 4765144 |
|---|
| End bp | 4765566 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642740101 |
|---|
| Product | PTS system fructose subfamily transporter subunit IIA |
|---|
| Protein accession | YP_002043778 |
|---|
| Protein GI | 194442733 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.819144 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGAC ATTATATTTT CGCCAGCCAC GGCACGCTGG CCAGCGGGGT TTTAAACTCC
GTGGAGCTGA TTTTAGGCAA ACGGTCAAAT GTCTGGACGC TGTGCGCTTA CGTTGAAGAG
AGCGTAGATT TAAGCCAGCA GGTAGATACG CTAATTGCCC GGATCCCGCC GGAAGATGAA
ATTATTGCGC TGACCGATAT TTTTGCCGGC AGCGTGAATA ATGAATTTGT CCGTTATTTA
TCACGGGAAA ATTTTCATCT GCTGGCAGGG ATTAACCTGC CGCTGGTTAT CGATCTCTTT
ATGTCGGAAA ACGATGGCAA TACCACGCAT ACCATAATGA CGGCGTTAGC GGATTCAAAA
GAAAATATTC AGTATTGCAA TCAAACTATC ACCAGCGCCA TGCAAAGCGA TAAAGATTTT
TAA
|
|---|
| Protein sequence | MKRHYIFASH GTLASGVLNS VELILGKRSN VWTLCAYVEE SVDLSQQVDT LIARIPPEDE
IIALTDIFAG SVNNEFVRYL SRENFHLLAG INLPLVIDLF MSENDGNTTH TIMTALADSK
ENIQYCNQTI TSAMQSDKDF
|
|---|
| |