Gene SNSL254_A4884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4884 
Symbol 
ID6482788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4756510 
End bp4757466 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content55% 
IMG OID642740095 
Productputative GTP-binding protein YjiA 
Protein accessionYP_002043772 
Protein GI194446456 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGA TTGCAGTTAC CCTACTTACC GGTTTTCTTG GTGCCGGCAA AACCACCCTA 
CTACGCCATA TCCTCAACGA ACAACATGGT TTTAAAATTG CTGTTATCGA AAACGAATTT
GGCGAAGTCT CCGTTGACGA TCAACTGATT GGCGATCGCG CCACACAGAT CAAAACCCTG
ACTAACGGCT GCATCTGCTG TACCCGCTCC AACGAGCTGG AAGATGCGCT ATTAGACCTG
CTCGACAGCC GCGACCGCGG CGATATTGCT TTCGACCGCC TGGTGATTGA ATGTACCGGC
ATGGCTGACC CCGGCCCGAT TATTCAGACC TTTTTCTCCC ATGACGTATT ATGCAAACGC
TACCTGTTAG ACGGCGTGAT TGCGCTGGTC GACGCGGTGC ACGCTAACGA GCAGATGAAC
CAGTTCACCA TCGCTCAGTC GCAGATAGGC TACGCCGACC GTATCCTGCT GACCAAAACC
GACGTGGCAG GCGACAGCGA GAAACTGCGC GAGCGGCTGG CGCGTATCAA CGCCCGCGCC
CCGGTTTATA CCGTGGTACA CGGCGATATT GACCTGAGTC AGTTGTTTAA TACCAGCGGC
TTTATGCTGG AAGAGAACGT GCTGGCAAGC CAACCGCGTT TCCACTTTAT TGCCGATAAA
CAGAACGATG TGTCGTCAAT TGTGGTGGAG CTGGATTACC CGGTGGATAT CAGCGAGGTT
TCGCGGGTGA TGGAAAACCT GCTTCTGGAA TCAGCGGATA AACTGCTGCG TTACAAAGGG
ATGCTGTGGA TCGACGGCGA ACCCAACCGT CTGCTGTTCC AGGGCGTGCA GCGTCTCTAC
AGCGCCGACT GGGACAGACC GTGGGGCGAC GAAACGCCGC ACAGCACGCT AGTGTTTATC
GGGATCCAGT TGCCGGAAGA CGAGATCAGA GCGGCGTTTG CGGGGTTAAG GAAGTAA
 
Protein sequence
MIPIAVTLLT GFLGAGKTTL LRHILNEQHG FKIAVIENEF GEVSVDDQLI GDRATQIKTL 
TNGCICCTRS NELEDALLDL LDSRDRGDIA FDRLVIECTG MADPGPIIQT FFSHDVLCKR
YLLDGVIALV DAVHANEQMN QFTIAQSQIG YADRILLTKT DVAGDSEKLR ERLARINARA
PVYTVVHGDI DLSQLFNTSG FMLEENVLAS QPRFHFIADK QNDVSSIVVE LDYPVDISEV
SRVMENLLLE SADKLLRYKG MLWIDGEPNR LLFQGVQRLY SADWDRPWGD ETPHSTLVFI
GIQLPEDEIR AAFAGLRK