| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4792 |
|---|
| Symbol | |
|---|
| ID | 6485490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 4666572 |
|---|
| End bp | 4667690 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642740006 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002043684 |
|---|
| Protein GI | 194446149 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
|---|
| TIGRFAM ID | [TIGR01437] uncharacterized pyridoxal phosphate-dependent enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 85 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCGA TTTTTGAGAA GTATCAATTA AAACAGGTGA TTAACGCCTC CGGACGTATG
ACGGCGCTCG GCGTCTCTAC GCCGCGCCCG GAAGTGATAG ACGCGGCGAT GGCCGGAATG
AATCAGTATT TCGAGATGAA AGATCTGGTG AATAAAACCG GCGAGTACAT TGCGAAATTG
CTGGAGGTGG AAGGGGCGAC GGTAGTCTCC TGCGCCAGTG CGGGTCTTGC CCAGTCGGTT
GCCGCGGTAC TGGTTCAGGA CAGCGACTGG CTGCTGGAAA ACCTGCACGT TACACCGATT
GAAAATAACG AAATCGTCCT GCCAAAGGGC CACAACGTCA ACTTTGGCGC GCCGGTGGGA
ACGATGGTGG CGCTGGGCGG CGGCAAACTG GTGGAAGCCG GTTACGCCAA CGAATGTTCC
GCCGCGCAGT TGGCGGCGGC CATTACGCCG CGCACGGCGG CTATTCTGTA TATCAAATCT
CACCACTGCG TGCAGAAAAG TATGCTCAGC GTGGAGCAGG CTGCGGTGGT GGCGCGCACG
CATAATCTCC CGCTGATTGT GGACGCGGCG GCGGAAGAAG ATTTGCAGTG CTACTACCGC
GTGGGCGCAG ATCTCGTTAT CTATAGCGGC GCAAAAGCGA TTGAAGGGCC GACCAGCGGG
CTGGTGATTG GCAAAACACA GTATGTTGAG TGGGTAAAAC GTCAGTCAGC GGGCATTGGC
CGGGCGATGA AGGTCGGCAA AGAGGGAATT GTTGGCCTGA CCTGCGCCAT TGAATTGTAC
CTGCGGGCGC AAAAAGAGAG CGGCGCGGAG ATGGTAGAAA AAATGGCGCC CTTTATCGAC
ACGTTGAACA CGTTTAACGG CGTCAGCGCC CGCGTGGTGT GGGACAGCGC CGGACGCGAC
ATCGCGCGCA CGGAAATTAA GTTTGATGAA GCCGTTACCG GCATCGCCAC AGGCGAACTG
GTCGACGCGC TGAAGCAAGG AGAATACGCG ATTTACTTTC GCGGATACAA AGCCAACGAA
GGGATTATTG AAGCGGATGT CCGCAGCGTC GATCGCGCGC AGTTAGCGAT TGTGGCGCGT
CGTATTGGCG AGGTGATTAA TCAGGAGAAA CAAGCATGA
|
|---|
| Protein sequence | MPSIFEKYQL KQVINASGRM TALGVSTPRP EVIDAAMAGM NQYFEMKDLV NKTGEYIAKL
LEVEGATVVS CASAGLAQSV AAVLVQDSDW LLENLHVTPI ENNEIVLPKG HNVNFGAPVG
TMVALGGGKL VEAGYANECS AAQLAAAITP RTAAILYIKS HHCVQKSMLS VEQAAVVART
HNLPLIVDAA AEEDLQCYYR VGADLVIYSG AKAIEGPTSG LVIGKTQYVE WVKRQSAGIG
RAMKVGKEGI VGLTCAIELY LRAQKESGAE MVEKMAPFID TLNTFNGVSA RVVWDSAGRD
IARTEIKFDE AVTGIATGEL VDALKQGEYA IYFRGYKANE GIIEADVRSV DRAQLAIVAR
RIGEVINQEK QA
|
|---|
| |