Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4732 |
Symbol | |
ID | 6485328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4614052 |
End bp | 4614750 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642739948 |
Product | PspA/IM30 family protein |
Protein accession | YP_002043626 |
Protein GI | 194446754 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.783579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAATTT TAAAAAGTTT GTTCACGTTA GGTAAATCAT TCGTTGCTCA GGCAGAAGAC GCCATTGATG AAGCGCAGGG TGTACGTATG CTGGAGCAGC ATATTCGCGA CGCAAAAGCC GAGCTGGATA AAGCGGGTAA ATCCAGAGTG GATTTATTGG CGCGGGTGAA GTTAAGCCAT GACAAGCTGA ATGATTTACG TGAGCGTAAA GCCAGCCTTG AAACACGGGC GTTGGCGGCA ATGAGTAAGA ATGTCGACGC CGCTTTACTC AACGAAGTGG CGGAAGAAAT AGCCCGTCTG GAAAATGCCA TTCTTGCCGA AGAACAGGTG CTGACTAATC TGGAAGCCTC TCGCGATGCG GTGGAGAAGG CCGTAACGGC GACAGGCCAG CGGATTGCGC AGTTTGAGCA GCAACTTGAA GTGGTTAAGG CGACAGAAGC CATGCAGCGC GCGCAGCAGG CGGTGACGAC CTCGACCGTC GGAGCCGCGT CGAATGTGTC TACGGCGGCG GAGTCGCTTA AACGTTTACA AACGCGTCAG GCTGAACGCC AGGCCCGGCT GGATGCCGCC GCGCAGCTGG AAAAAGTCGC CGATGGACGC GACCTGGATG AAAAACTGGC GCAGGCGGGT ATTGGCGCAA CCAATAAAAG CAATGCTCAG GATGTGTTGG CGCGTTTACA GCGTCAACAA GGCGAATAA
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Protein sequence | MGILKSLFTL GKSFVAQAED AIDEAQGVRM LEQHIRDAKA ELDKAGKSRV DLLARVKLSH DKLNDLRERK ASLETRALAA MSKNVDAALL NEVAEEIARL ENAILAEEQV LTNLEASRDA VEKAVTATGQ RIAQFEQQLE VVKATEAMQR AQQAVTTSTV GAASNVSTAA ESLKRLQTRQ AERQARLDAA AQLEKVADGR DLDEKLAQAG IGATNKSNAQ DVLARLQRQQ GE
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