| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4584 |
|---|
| Symbol | |
|---|
| ID | 6482388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 4452969 |
|---|
| End bp | 4453484 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642739810 |
|---|
| Product | zinc uptake transcriptional repressor |
|---|
| Protein accession | YP_002043492 |
|---|
| Protein GI | 194444041 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.735671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA CCACAACGCA AGAGTTACTG GCGCAAGCTG AAAAACTCTG CGCGCAGCGC
AACGTGCGCC TGACGCCTCA GCGCCTCGAA GTGCTGCGCC TGATGAGTCT GCAACAGGGT
GCCATCAGCG CATACGATTT GCTCGATTTG CTGCGCGAAA CGGAACCACA GGCCAAACCG
CCCACCATTT ACCGCGCGCT GGATTTTTTG CTCGAACAGG GTTTTGTCCA TAAAGTGGAA
TCCACCAATA GTTATGTGGT TTGCCACCTG TTCGACCAGC CGACGCACAG CTCGGCCATG
TTTATCTGCG ATCGTTGCGG CGTGGTGAAG GAAGAGTGTG CCGAGGGCGT GGAAGACATC
ATGCATACGC TGGCGGCTAA AATGGGCTTT GCGCTACGAC ATAACGTTAT TGAGGCGCAC
GGTCTGTGCC CTGCGTGCGT AGAAGTAGAA GCGTGTCGCC ATCCGGGAAA CTGTGGTCAC
GATCACTCGG TGCTGGTGAA GAAAAAACCA CGTTAG
|
|---|
| Protein sequence | MEKTTTQELL AQAEKLCAQR NVRLTPQRLE VLRLMSLQQG AISAYDLLDL LRETEPQAKP
PTIYRALDFL LEQGFVHKVE STNSYVVCHL FDQPTHSSAM FICDRCGVVK EECAEGVEDI
MHTLAAKMGF ALRHNVIEAH GLCPACVEVE ACRHPGNCGH DHSVLVKKKP R
|
|---|
| |