Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4546 |
Symbol | |
ID | 6484144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4418774 |
End bp | 4419496 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642739772 |
Product | baseplate |
Protein accession | YP_002043454 |
Protein GI | 194443878 |
COG category | [R] General function prediction only |
COG ID | [COG4540] Phage P2 baseplate assembly protein gpV |
TIGRFAM ID | [TIGR01644] phage baseplate assembly protein V |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGCG TTACCCGCCA GACGGGTATT ATCAGCGATA TTGATGAGGC GGTCGTGCGC GTCAGAGTCA CTCTTCCGGA GTGCGATAAC CTGCGCAGTA ACTGGCTTGC GGTGCTGCAA CGCAACACGC AGGACAACAA AGATTACTGG TTGCCGGATA TTGGCGAACA GGTGGAGGTT TTGCTCGACG ACAACGGCGA GGATGGGGTG GTGCTGGGCG CGGTCTACTC CAGCGTGGAT ACCGCGCCGC TGGCCTCGCG CGACAAACGC TACGTACAGT TCTCCGACGG CGCAGCTTTT GAATATGACC GCCAGTTACA CCAGCTCACC GTCAACGGCG GCATAGAAAA AATCGTCATT GAAGTGAAGG AACGTACGCA GCTTACTTCA CCGCAGGTCG AGGTCAGGGC GCAGCACGTC ACGGTGATAT CAGAAACCGT AGACGTGGCG GCCACCTCCG TGGGCGTCAA GGCGGTAGAT GTCAACGTGG AAGCGCCCCG TACGGGCATT AAAGCGCTGA ATGTCACCGT CGATGCGCCG CTCAGCACCT TTACCGGCGA CGTTACCGTG ATGAAAAAAC TCACCTGGCT TGGCGGCATG GCCGGTAGCG GCGGTATTGG AAACAGCGCG GTGATTACTG GCAACGTGAA TGTCCTCGGC AACGTTAACG CCAGCGGCAC GCTGATGGAT AGCGGCGGCA ACTCCAACCA CCACTCTCAC TAA
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Protein sequence | MKGVTRQTGI ISDIDEAVVR VRVTLPECDN LRSNWLAVLQ RNTQDNKDYW LPDIGEQVEV LLDDNGEDGV VLGAVYSSVD TAPLASRDKR YVQFSDGAAF EYDRQLHQLT VNGGIEKIVI EVKERTQLTS PQVEVRAQHV TVISETVDVA ATSVGVKAVD VNVEAPRTGI KALNVTVDAP LSTFTGDVTV MKKLTWLGGM AGSGGIGNSA VITGNVNVLG NVNASGTLMD SGGNSNHHSH
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