Gene SNSL254_A4546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4546 
Symbol 
ID6484144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4418774 
End bp4419496 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content58% 
IMG OID642739772 
Productbaseplate 
Protein accessionYP_002043454 
Protein GI194443878 
COG category[R] General function prediction only 
COG ID[COG4540] Phage P2 baseplate assembly protein gpV 
TIGRFAM ID[TIGR01644] phage baseplate assembly protein V 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGCG TTACCCGCCA GACGGGTATT ATCAGCGATA TTGATGAGGC GGTCGTGCGC 
GTCAGAGTCA CTCTTCCGGA GTGCGATAAC CTGCGCAGTA ACTGGCTTGC GGTGCTGCAA
CGCAACACGC AGGACAACAA AGATTACTGG TTGCCGGATA TTGGCGAACA GGTGGAGGTT
TTGCTCGACG ACAACGGCGA GGATGGGGTG GTGCTGGGCG CGGTCTACTC CAGCGTGGAT
ACCGCGCCGC TGGCCTCGCG CGACAAACGC TACGTACAGT TCTCCGACGG CGCAGCTTTT
GAATATGACC GCCAGTTACA CCAGCTCACC GTCAACGGCG GCATAGAAAA AATCGTCATT
GAAGTGAAGG AACGTACGCA GCTTACTTCA CCGCAGGTCG AGGTCAGGGC GCAGCACGTC
ACGGTGATAT CAGAAACCGT AGACGTGGCG GCCACCTCCG TGGGCGTCAA GGCGGTAGAT
GTCAACGTGG AAGCGCCCCG TACGGGCATT AAAGCGCTGA ATGTCACCGT CGATGCGCCG
CTCAGCACCT TTACCGGCGA CGTTACCGTG ATGAAAAAAC TCACCTGGCT TGGCGGCATG
GCCGGTAGCG GCGGTATTGG AAACAGCGCG GTGATTACTG GCAACGTGAA TGTCCTCGGC
AACGTTAACG CCAGCGGCAC GCTGATGGAT AGCGGCGGCA ACTCCAACCA CCACTCTCAC
TAA
 
Protein sequence
MKGVTRQTGI ISDIDEAVVR VRVTLPECDN LRSNWLAVLQ RNTQDNKDYW LPDIGEQVEV 
LLDDNGEDGV VLGAVYSSVD TAPLASRDKR YVQFSDGAAF EYDRQLHQLT VNGGIEKIVI
EVKERTQLTS PQVEVRAQHV TVISETVDVA ATSVGVKAVD VNVEAPRTGI KALNVTVDAP
LSTFTGDVTV MKKLTWLGGM AGSGGIGNSA VITGNVNVLG NVNASGTLMD SGGNSNHHSH