Gene SNSL254_A4504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4504 
Symbol 
ID6485774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp4377130 
End bp4377822 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content55% 
IMG OID642739733 
Producthypothetical protein 
Protein accessionYP_002043419 
Protein GI194446295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.0307529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAGTT TTATCGAAGG GGCTCGTCAG CCCCTTTTGT CTGTCTGGCG TCGCGCGTTT 
CTGTTTTCTG GCGCGCTGTT GCTGACTGCC TGCAGTCATA ACGCTTCACC GCCTCCGTTT 
ACTGCCAGCG GCTTTGCCGG CGATCACGGC GCGGTGCGTA TCTGGCGTAA AGATACGAAC 
GATGAAGTCC ATCTGCTTTC TGTTTTTAGC CCGTGGCATA GTGGTAGCAC GACGACCAGC 
GAATATCGTT GGCAGGGTGA TACGCTTTCG CTTATTGAAC TCAATATTTA CAGCAAACCT 
CCAGAACATA TTCGCGCGCG TTTCGACGCT CATGGCGAAC TCAGTTTTAT GCAGCGTGAA 
GTCGGGGGGC AGAAGCAGCA GCTTTCCAAC GATCAGATTG CCTTGTATCG CTATCGCGCC 
GAACAAATCC GTCAGACCAG CGACGCATTG CGCCTGGGGC GGGTCATACT ACGCCAGGGA 
CGCTGGCACG CCGACCATAC GGTAACCACC TGTGAAGGTG AAACGCTGAA ACCGGATCTG 
GACTCCTGGG CAATAAGCCA CATTGAGCGC CGCCAGAACC ACTCATCGGT AGAGGTGAGC 
GTAGCATGGC TGGAGGCGCC GGAAGGATCG CAACTTTTGC TGGTGGCGAA TTCAGATTTT 
TGTCACTGGC AGCCGCAAGC GAAAAGCTTT TGA
 
Protein sequence
MNSFIEGARQ PLLSVWRRAF LFSGALLLTA CSHNASPPPF TASGFAGDHG AVRIWRKDTN 
DEVHLLSVFS PWHSGSTTTS EYRWQGDTLS LIELNIYSKP PEHIRARFDA HGELSFMQRE 
VGGQKQQLSN DQIALYRYRA EQIRQTSDAL RLGRVILRQG RWHADHTVTT CEGETLKPDL 
DSWAISHIER RQNHSSVEVS VAWLEAPEGS QLLLVANSDF CHWQPQAKSF