Gene SNSL254_A4365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4365 
Symbol 
ID6484914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp4243352 
End bp4244215 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content57% 
IMG OID642739607 
Productphage capsid scaffolding protein GpO 
Protein accessionYP_002043301 
Protein GI194445842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00000000101655 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTAAAA AAATTTCGAA ATGGTTTCGC ATCGGCGTCG AGGGGGACAC CTGCGACGGT 
CGCGTCATCA GTGCGACCGA TATTCAGGAA ATGGCCGACG GCTTTGACCC GCGCGTCTAC 
GGCTGTCGCA TTAACCTCGA GCATATCCGC AGCGTTATTC CCGACAGCCC GTTTTGTCGC 
TATGGCGACG TCACGGAAGT GAAAGCGGAA GTGATCGACG AAGATTCGGC ACTTAACGGC 
AAGCTGGCGC TGTTCGGCAA AATTGCCCCG CTCGACAACC TGCTCGCGAT GCTGGCGAAA 
GGCCAGAAGG TTTACACCTC GATGGAAATT CGTCCTAACT TTGCCAACAC CGGCAAATGT 
CACCTCATCG GGCTGGCGGT AACCGATGAC CCTGCGAGCC TCGGTACCGA ATACCTGCAA 
TTCTGCTCCC GCGCACAGCA AAACCCACTG GCAGGGAAGA AAGACCAGCC GGGCGACCTG 
TTCTCAGTGG CAACTCTTGC CGAGCTGGAA TTCGAAGACC TGCCCGACAA CCTGCTGAGC 
AAAATCAGCG ACACCGTGAA AGGCATCTTC AGCCGTAAAC AGACTGACGA CGATGCGCGT 
TTCGGTGATG TACATGAAGC CGTGACCGCC ATCGCCGAAC GGGTGCAGAT TGGCGGCGAA 
AGCGCTGAGG TGCGTTTCAG GGCCATTGAA ACCGAACTCG CCGACGTCAA AAAAGCGCTG 
GCCGAACAGG CCGATGCCAC CTCGCAGCAA TTCAGCACCC TGACCACCAC GCTGGAAAAT 
ACCGAAAGCA GATCACAGGC GCGCCGCAAG TTAAGTACCG GCGGTGACGG TGATTCGGCG 
GTCTCCACGC TGACCGACTG CTAA
 
Protein sequence
MAKKISKWFR IGVEGDTCDG RVISATDIQE MADGFDPRVY GCRINLEHIR SVIPDSPFCR 
YGDVTEVKAE VIDEDSALNG KLALFGKIAP LDNLLAMLAK GQKVYTSMEI RPNFANTGKC 
HLIGLAVTDD PASLGTEYLQ FCSRAQQNPL AGKKDQPGDL FSVATLAELE FEDLPDNLLS 
KISDTVKGIF SRKQTDDDAR FGDVHEAVTA IAERVQIGGE SAEVRFRAIE TELADVKKAL 
AEQADATSQQ FSTLTTTLEN TESRSQARRK LSTGGDGDSA VSTLTDC