| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4340 |
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| Symbol | |
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| ID | 6485086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 4225544 |
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| End bp | 4226527 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642739584 |
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| Product | trap dicarboxylate transporter subunit DctP |
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| Protein accession | YP_002043278 |
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| Protein GI | 194443902 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.00110034 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCAAC CTGGTTTTAT ACGTCTGGCT ACGTTGGCCT TACTCTCCAC ACTCTCTTTC
TTCTCCCACG GCGAAACCAT TTTGCGCCTG GCCTACGCTG AAAATAGCCA GCCGGTAAAA
GATGCGTTGC ACTTCCTGGG GCAGCAAGTT GAAGAGAAAA CGGGCGGCGA TATCAAAGTA
CAGTACTTCC CGGACGGACA GCTTGGCGGA GAGCGCGAAC TGGTGGAGTT GACGCAGGTC
GGCGTCGTCG ACATCACTAA AGTGTCGTCC GGGCTGATGG AGAGTTTTTC GCCTGAGTAC
GGCGTGTTCT CACTTCCCTA CCTGTTTGCC ACCGTCGATG AATACTACCG CGTAATGGAT
AACCCACAGG TGATGGAGCC TGTTTATCAG TCCACCGCCG CGCAGGGGTT TGTCGGCGTA
GGCTGGTATG ATTCCGGCGC GCGTAATTTT TATATGAGCA AAGCGCCGGT TAAACGCATT
GAGGATTTAC GCGGGAAAAA GATCCGCGTC ATGCAGAGTG AGACGGCGAT CCAAACTCTC
AAACTGCTGG GCGCTTCGCC CATCGCCATG AGCCAGGCGG AGGTCTATAC CTCGTTACAA
CAAGGCATTC TCGACGGCGC GGAAAACAAT GAGTTCGCTC TCACCATCGC CCGCCACGGC
GAAGTCGCCC GTTATTACAC CTACGATATG CACACCCGCA TTCCCGATAT CCTGCTAATG
AGTACCCTCA CGCTGGAAAA GCTGACGCCG GAACAGCAGC GCATCGTCGA AGCCGCCATC
AAGGCGTCGA TCGAATTTGA GAAAGCCGCA TGGGACAAGG AAATAGAGAA AACCAGGCTG
GCGGCGGTAA AAGATTTCAA CGTTGAATTC TACGAGATCG ACAAAAAACC CTTCCAGAAG
GCAGTACAGC CTATTTACGA CGGCCTGAAA AACAAACCGC GGCTTTACGG GCTGTATCAA
CGTATCCAGA CAGCAAAAAA TTAA
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| Protein sequence | MKQPGFIRLA TLALLSTLSF FSHGETILRL AYAENSQPVK DALHFLGQQV EEKTGGDIKV
QYFPDGQLGG ERELVELTQV GVVDITKVSS GLMESFSPEY GVFSLPYLFA TVDEYYRVMD
NPQVMEPVYQ STAAQGFVGV GWYDSGARNF YMSKAPVKRI EDLRGKKIRV MQSETAIQTL
KLLGASPIAM SQAEVYTSLQ QGILDGAENN EFALTIARHG EVARYYTYDM HTRIPDILLM
STLTLEKLTP EQQRIVEAAI KASIEFEKAA WDKEIEKTRL AAVKDFNVEF YEIDKKPFQK
AVQPIYDGLK NKPRLYGLYQ RIQTAKN
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