Gene SNSL254_A4189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4189 
Symbol 
ID6484118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4082274 
End bp4082615 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content45% 
IMG OID642739443 
ProductXRE family transcriptional regulator 
Protein accessionYP_002043146 
Protein GI194446197 
COG category[S] Function unknown 
COG ID[COG5606] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones99 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGCCA AAACTGATAG TGATATTCGC CATGTGACGC CATCTGGCGG TAATGTTTTT 
GCTGATTTGG GGTTTCATAA GCAGGACGCA GAAAAGTTTT ACGCTGATTC CCTGAATGAA
ATCGAAAACA CGTTAGCCAT TAAACAACAG CTAATGGAAG AAATTACCCT CTGGATTACG
CAAAACCAGA TGAAGCAAGC CGAGGTTGCT ACAGTTTTGC ATATATCCCG ACCGCGCGTT
TCGGATGTCG TCAACAAGAA ATGCAGCAAA TTCACCATTG ATGCTCTGGT GAATATGCTT
AGCCGTATTG GGAAGCCTGT TCGGGTAATG GTAGGGCCGT AA
 
Protein sequence
MIAKTDSDIR HVTPSGGNVF ADLGFHKQDA EKFYADSLNE IENTLAIKQQ LMEEITLWIT 
QNQMKQAEVA TVLHISRPRV SDVVNKKCSK FTIDALVNML SRIGKPVRVM VGP