| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4163 |
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| Symbol | trkD |
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| ID | 6483045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 4055859 |
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| End bp | 4057727 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642739419 |
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| Product | potassium transport protein Kup |
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| Protein accession | YP_002043128 |
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| Protein GI | 194446162 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3158] K+ transporter |
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| TIGRFAM ID | [TIGR00794] potassium uptake protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.134372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 89 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTG ATAATAAGCA ATCGTTGCCT GCGATTACCC TCGCAGCTAT TGGGGTTGTC
TACGGTGATA TTGGTACCAG CCCGCTTTAT ACGCTTCGTG AATGTTTGTC CGGTCAGTTT
GGTTTTGGCG TTGAACGAGA TGCCGTGTTT GGTTTTCTGT CGCTGATCTT CTGGCTACTC
ATCTTTGTGG TTTCCATCAA ATATCTCACC TTCGTGATGC GCGCCGATAA CGCGGGTGAA
GGTGGAATTT TGACGCTGAT GTCGCTTGCC GGGCGTAATA CCTCGGCGCG CACCACATCC
ATGTTAGTTA TCATGGGACT GATAGGCGGC AGCTTTTTCT ATGGCGAAGT GGTCATTACG
CCGGCGATTT CAGTGATGTC GGCGATTGAA GGCCTGGAAA TTGTCGCGCC GCAGCTGGAT
ACCTGGATTG TCCCGCTCTC CATTATTGTG CTGACTCTGT TGTTTATGAT TCAGAAGCAC
GGTACGGGAA TGGTAGGGAA ACTCTTTGCG CCGATCATGC TGACCTGGTT TTTAATCCTG
GCGGTACTTG GCCTGCGCAG TATTATCGCC AATCCCGAAG TGTTACATGC GCTGAATCCT
GTCTGGGCGG TACGTTTTTT CCTTGAATAT AAAACCGTAT CATTTATTGC GTTGGGCGCG
GTGGTGCTGT CGATTACCGG CGTAGAGGCG TTGTACGCCG ATATGGGACA CTTCGGTAAG
TTCCCGATTC GCCTGGCGTG GTTTACCGTG GTATTGCCGT CGTTAGTACT GAACTACTTT
GGTCAGGGCG CATTGCTACT TAAGCATCCG GAAGCGATTA AAAACCCCTT CTTCCTGTTG
GCGCCGGACT GGGCGTTAAT TCCGCTGCTG ATTCTGGCCG CGCTGGCGAC GGTGATCGCC
TCCCAGGCGG TCATTTCCGG CGTTTTTTCG CTGACGCGTC AGGCTGTGCG TCTTGGCTAT
TTGTCGCCAA TGCGCATTAT CCATACCTCC GAGATGGAGT CCGGTCAGAT CTATATCCCT
TTCGTTAACT GGCTGCTTTA TTTCGCGGTC GTGGTTGTTA TTGTTAGCTT TGAGCACTCC
AGCAACCTGG CGGCGGCCTA TGGTATCGCC GTGACCGGCA CGATGGTACT GACGTCTATT
CTTTCTACGA CCGTGGCGCG TAAGAACTGG CACTGGAACA AATATTTTGT CGCGCTGATC
CTCATCGCGT TCCTGTGCGT GGATATCCCG CTGTTCTCGG CTAACCTCGA CAAATTGTTG
TCCGGCGGTT GGCTGCCGCT GAGCCTGGGC CTGATCATGT TCACGATCAT GACCACCTGG
AAGAGTGAGC GTTTTCGTCT GTTGCGTCGT ATGCATGAAC ACGGTAATTC GCTGGAAGCG
ATGATTGCTT CGCTGGAGAA GTCACCGCCG GTTCGGGTGC CGGGTACTGC CGTATACATG
TCGCGCGCGC TCAGTGTGAT CCCTTTTGCT TTATTGCATA ACCTGAAGCA CAACAAAGTG
TTGCATGAGC GCGTAATCTT ACTGACGTTG CGTACGGAAG ATGCGCCTTA TGTGCATAAC
GTTCGCCGGG TGCAGATTGA GCAGTTGTCT CCGACATTCT GGCGCGTGGT GGCTAGCTAC
GGCTGGCGCG AAACGCCAAA CGTTGAAGAG GTGTTCCACC GCTGCGGTCT GGAAGGGCTT
AGCTGTCGGA TGATGGAAAC GTCGTTCTTT ATGTCGCACG AGTCGTTGAT TGTCGGCAAA
CGCCCGTGGT ATTTGCGTCT GCGTGGCAAG CTGTATTTGT TGTTGCAACG CAACGCCCTG
CGCGCGCCGG ATCAGTTCGA GATCCCGCCT AACCGCGTGA TTGAGTTAGG TACGCAGGTC
GAGATTTAA
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| Protein sequence | MSTDNKQSLP AITLAAIGVV YGDIGTSPLY TLRECLSGQF GFGVERDAVF GFLSLIFWLL
IFVVSIKYLT FVMRADNAGE GGILTLMSLA GRNTSARTTS MLVIMGLIGG SFFYGEVVIT
PAISVMSAIE GLEIVAPQLD TWIVPLSIIV LTLLFMIQKH GTGMVGKLFA PIMLTWFLIL
AVLGLRSIIA NPEVLHALNP VWAVRFFLEY KTVSFIALGA VVLSITGVEA LYADMGHFGK
FPIRLAWFTV VLPSLVLNYF GQGALLLKHP EAIKNPFFLL APDWALIPLL ILAALATVIA
SQAVISGVFS LTRQAVRLGY LSPMRIIHTS EMESGQIYIP FVNWLLYFAV VVVIVSFEHS
SNLAAAYGIA VTGTMVLTSI LSTTVARKNW HWNKYFVALI LIAFLCVDIP LFSANLDKLL
SGGWLPLSLG LIMFTIMTTW KSERFRLLRR MHEHGNSLEA MIASLEKSPP VRVPGTAVYM
SRALSVIPFA LLHNLKHNKV LHERVILLTL RTEDAPYVHN VRRVQIEQLS PTFWRVVASY
GWRETPNVEE VFHRCGLEGL SCRMMETSFF MSHESLIVGK RPWYLRLRGK LYLLLQRNAL
RAPDQFEIPP NRVIELGTQV EI
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