Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4016 |
Symbol | |
ID | 6483385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3901584 |
End bp | 3902486 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642739275 |
Product | LysR family transcriptional regulator |
Protein accession | YP_002042985 |
Protein GI | 194446336 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTGC TGCAAATGGA TATGAACCTG TTAAAAGTAC TGTATGTGCT GCTGGAGACG AGCTCTACGG GGAAAACGGC GCAAAAGCTG GCTTTGTCGC CTTCTGCGGT AAGTCATGCG CTAATGAGAT TGCGCGATGC GCTAAACGAT CCGTTGTTTC GACGGGAAGG GAACCGCCAG ATTGCTACTC CTTATGCGCA GGCGCTGCGT GACAAATTGG CGCCTGTGTT TGTTTCGCTT AATGAGGAGC TATTTGGCGA TAAAGAGAAC GGCTCCCGTT GTTTTCGGGT GGTACTTCCT CCCGCATTGA ACGCGCTGCT TACGCCCGTT CTCGCAGAGA AAGGTCATCT TCATCAGGCG GTGATCGAGT GCCTTCCTTT TGCCCGCCGA CCCTGGCGTG ATGAACTGTT GGATAGCTCG GTTGATTTGG TGCTGGCAAT TGGCGACCAT CAAAAGCAGG TCAGCGCTCT GCATTACGAG CGGGTGGGGA CGACGCGTTT GATCGCGGTT TATGGCGCGC CATTGCGTTC ACGTCTGGAG AATGCCGCAG CGTTGAATTT TGCTGATCTG CAGCATTATC AACACATTTA CTGTTTGCCG TGGACAAAAG AGAACAACGA ACTGGACAGG CAGCAGGCTC GTGCCGGGTT TGAACGTCCG CTGGCGTTTG TTTGTCATGA TTACAGTCAA CTTGCGCCTG CTGTCCAGTC GGCGCCGCTA ATGGCGATTG TACCGCGCCC CTGGTATGAA AATTTATCCG ATAAGCGCGG TCTTTTTGTC CTGCCGCTTA CCGGGGAGCA GGCGGAAGGC GCTATTTTTA TGCAGTATCG GGTTTCGACG GTAGAGTGGA AGCGGCGCCT TATCGACGCT ATTCGCCGGA AATTAAAAAC GTACTACCGA TAA
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Protein sequence | MNLLQMDMNL LKVLYVLLET SSTGKTAQKL ALSPSAVSHA LMRLRDALND PLFRREGNRQ IATPYAQALR DKLAPVFVSL NEELFGDKEN GSRCFRVVLP PALNALLTPV LAEKGHLHQA VIECLPFARR PWRDELLDSS VDLVLAIGDH QKQVSALHYE RVGTTRLIAV YGAPLRSRLE NAAALNFADL QHYQHIYCLP WTKENNELDR QQARAGFERP LAFVCHDYSQ LAPAVQSAPL MAIVPRPWYE NLSDKRGLFV LPLTGEQAEG AIFMQYRVST VEWKRRLIDA IRRKLKTYYR
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