Gene SNSL254_A4016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4016 
Symbol 
ID6483385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3901584 
End bp3902486 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content53% 
IMG OID642739275 
ProductLysR family transcriptional regulator 
Protein accessionYP_002042985 
Protein GI194446336 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTGC TGCAAATGGA TATGAACCTG TTAAAAGTAC TGTATGTGCT GCTGGAGACG 
AGCTCTACGG GGAAAACGGC GCAAAAGCTG GCTTTGTCGC CTTCTGCGGT AAGTCATGCG
CTAATGAGAT TGCGCGATGC GCTAAACGAT CCGTTGTTTC GACGGGAAGG GAACCGCCAG
ATTGCTACTC CTTATGCGCA GGCGCTGCGT GACAAATTGG CGCCTGTGTT TGTTTCGCTT
AATGAGGAGC TATTTGGCGA TAAAGAGAAC GGCTCCCGTT GTTTTCGGGT GGTACTTCCT
CCCGCATTGA ACGCGCTGCT TACGCCCGTT CTCGCAGAGA AAGGTCATCT TCATCAGGCG
GTGATCGAGT GCCTTCCTTT TGCCCGCCGA CCCTGGCGTG ATGAACTGTT GGATAGCTCG
GTTGATTTGG TGCTGGCAAT TGGCGACCAT CAAAAGCAGG TCAGCGCTCT GCATTACGAG
CGGGTGGGGA CGACGCGTTT GATCGCGGTT TATGGCGCGC CATTGCGTTC ACGTCTGGAG
AATGCCGCAG CGTTGAATTT TGCTGATCTG CAGCATTATC AACACATTTA CTGTTTGCCG
TGGACAAAAG AGAACAACGA ACTGGACAGG CAGCAGGCTC GTGCCGGGTT TGAACGTCCG
CTGGCGTTTG TTTGTCATGA TTACAGTCAA CTTGCGCCTG CTGTCCAGTC GGCGCCGCTA
ATGGCGATTG TACCGCGCCC CTGGTATGAA AATTTATCCG ATAAGCGCGG TCTTTTTGTC
CTGCCGCTTA CCGGGGAGCA GGCGGAAGGC GCTATTTTTA TGCAGTATCG GGTTTCGACG
GTAGAGTGGA AGCGGCGCCT TATCGACGCT ATTCGCCGGA AATTAAAAAC GTACTACCGA
TAA
 
Protein sequence
MNLLQMDMNL LKVLYVLLET SSTGKTAQKL ALSPSAVSHA LMRLRDALND PLFRREGNRQ 
IATPYAQALR DKLAPVFVSL NEELFGDKEN GSRCFRVVLP PALNALLTPV LAEKGHLHQA
VIECLPFARR PWRDELLDSS VDLVLAIGDH QKQVSALHYE RVGTTRLIAV YGAPLRSRLE
NAAALNFADL QHYQHIYCLP WTKENNELDR QQARAGFERP LAFVCHDYSQ LAPAVQSAPL
MAIVPRPWYE NLSDKRGLFV LPLTGEQAEG AIFMQYRVST VEWKRRLIDA IRRKLKTYYR