Gene SNSL254_A3964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3964 
SymbolmtlD 
ID6482434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3849885 
End bp3851033 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content54% 
IMG OID642739224 
Productmannitol-1-phosphate 5-dehydrogenase 
Protein accessionYP_002042934 
Protein GI194445748 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0246] Mannitol-1-phosphate/altronate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.866494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.811691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TACATTTTGG CGCAGGTAAT ATCGGTCGTG GCTTTATCGG CAAATTGCTG 
GCTGACGCGG GGATACAACT GACGTTTGCG GATGTAAACC AGGTCGTACT CGATGCCCTG
AATGCCCGTC ATAGCTATCA GGTTCATGTT GTGGGTGAAA ATGAGCAGGT GGATACCGTT
TCCGGCGTCA ACGCTGTCAG CAGCATCGGC GATGATGTTG TCGACCTGAT TGCCCACGTT
GATTTAATCA CCACTGCCGT GGGCCCGGTG GTGCTTGAGC GTATCGCTCC GGCTATCGCT
AAAGGGCTGG TAAAACGTAA GGCGCAGGGC GTGGATGCCC CGCTGAATAT CATCGCCTGT
GAAAATATGG TGCGCGGCAC CACGCAGCTG AAAGGCCACG TAATGAACGC GCTGGCGGAT
GGCGATAAAG CCTGGGTTGA ACAGCACGTC GGTTTTGTCG ATTCCGCCGT TGACCGTATT
GTGCCGCCAT CTGCTTCTGC GACCAACGAT CCGCTGGAAG TGACGGTAGA AACGTTCAGC
GAGTGGATCG TCGATAAAAC CCAGTTTAAA GGCGCGTTGC CAAACATTCC GGGGATGGAG
TTAACGGATA ACCTGATGGC ATTTGTCGAA CGTAAACTCT TCACGCTGAA CACAGGTCAT
GCTATAACCG CGTACCTCGG CAAATTAGCC GGTCATCAGA CCATTCGCGA CGCTATTCTC
GATGAGAGTA TTCGCGCGGT GGTGAAAGGC GCGATGGAAG AAAGCGGCGC GGTGCTAATC
AAACGCTACG GTTTTGATGC CGACAAACAT GCGGCATACA TTCAGAAAAT CCTCGGTCGT
TTTGAAAACC CGTATCTGAA AGATGACGTC GAACGCGTAG GTCGTCAGCC GCTACGCAAA
CTCAGCGCGG GCGACCGTCT GATCAAACCG CTGCTTGGCA CCCTGGAATA TGGTCTGCCG
CATGTGAATC TGGTCAAAGG GATCGCGGCG GCGATGCATT TCCGTAGCGA TGAAGATCCG
CAGGCGCAAG AGTTGGCGGC ACTAATTACC GAAAAAGGCC CGCAGGCCGC GCTGGCGCAA
ATTTCCGGGC TGGATGCCAA TAGCGATGTG GTGGCGGAGG CGGTTAACGC ATATAACGCG
ACCAAATGA
 
Protein sequence
MKALHFGAGN IGRGFIGKLL ADAGIQLTFA DVNQVVLDAL NARHSYQVHV VGENEQVDTV 
SGVNAVSSIG DDVVDLIAHV DLITTAVGPV VLERIAPAIA KGLVKRKAQG VDAPLNIIAC
ENMVRGTTQL KGHVMNALAD GDKAWVEQHV GFVDSAVDRI VPPSASATND PLEVTVETFS
EWIVDKTQFK GALPNIPGME LTDNLMAFVE RKLFTLNTGH AITAYLGKLA GHQTIRDAIL
DESIRAVVKG AMEESGAVLI KRYGFDADKH AAYIQKILGR FENPYLKDDV ERVGRQPLRK
LSAGDRLIKP LLGTLEYGLP HVNLVKGIAA AMHFRSDEDP QAQELAALIT EKGPQAALAQ
ISGLDANSDV VAEAVNAYNA TK