Gene SNSL254_A3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3944 
Symbol 
ID6483927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3826369 
End bp3826842 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content61% 
IMG OID642739204 
Productoxidoreductase AegA 
Protein accessionYP_002042914 
Protein GI194442517 
COG category[C] Energy production and conversion 
COG ID[COG1142] Fe-S-cluster-containing hydrogenase components 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.716266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGT TTATTATGGC GGATGCGTCG GCGTGTATCG GGTGTCGTAC CTGCGAGGTC 
GCCTGCGTGG TGTCGCATCA GGAGCAGCAG AATAGCGCGG CGGTGACGAC GGCGGACTTT
GTGCCGCGTA TCCGGGTGAT AAAAGAGGAT TGCTTCACCA CGGCCACGGT CTGCCATCAG
TGTGAGGACG CGCCGTGCGC GAATGTCTGC CCGGTACAGG CGATTCGCCG TGATCGGGGG
CATATCTTCG TGACGCCATC GCGCTGCATT GGTTGTAAAA GCTGTATGCT GGCTTGCCCG
TTTGGTGCGA TGACCGTGGT GACGTCCGCG TCAGGCGCGC AGGCGATTAA ATGCGATCTT
TGCTGGCATC GGGAAGCGGG GCCGGCGTGC GTGGAAGCCT GCCCGACCAG TGCGTTACAG
TGCGTTGACG CAGCACACGT GCAGCGCCAG CGCCTCTATT CTCAACCTTT CTGA
 
Protein sequence
MNRFIMADAS ACIGCRTCEV ACVVSHQEQQ NSAAVTTADF VPRIRVIKED CFTTATVCHQ 
CEDAPCANVC PVQAIRRDRG HIFVTPSRCI GCKSCMLACP FGAMTVVTSA SGAQAIKCDL
CWHREAGPAC VEACPTSALQ CVDAAHVQRQ RLYSQPF