Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3901 |
Symbol | |
ID | 6483843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3783484 |
End bp | 3784782 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642739163 |
Product | inner membrane transport protein YhaO |
Protein accession | YP_002042874 |
Protein GI | 194445021 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGACG ACACATTACC ATTAAATAAC AGTAACGCTA CGACCACACC GCTTTCAACG AGATTACCGT TTACAAAATA TGATTTTGGC TGGGTGCTCT TGTGTATCGG TATGGCGATC GGCGCCGGTA CCGTCTTAAT GCCAGTGCAA ATCGGTCTCA AGGGGATCTG GGTATTTATT ACCGCTTTTA TCATCGCCTA TCCCGCTACC TATATTGTGC AGGATATTTA TCTAAAAACG TTATCTGAAA GCGAAACCTG TGACGATTAT ACGGATATTA TCAGTCACTA TCTTGGCAAA AACTGGGGCG TTTTTCTCGG TGTAATCTAT TTTCTTATGA TTATCCACGG GGTGTTTATT TACTCCCTGT CGGTGGTGTT TGATAGCGCC TCCTATATCA AAACCTTCGG CCTTACTGAG GCCGATCTTT CGCAGTCTAT TATCTATAAA GTCGCGATTT TCGCCGTGCT GGTGGCGATT GCCTCCGGCG GGGAAAAGTT ATTATTTAAA ATTTCCGGCC CGATGGTGGT GGTAAAAGTC GGGATCATTC TGATATTCGG TTTTGCGATG ATCCCACACT GGAATCTTGA TAATATTTCC GCCTTTCCCG CCGCATCGGT TTTCTTTCGC GACGTACTGC TCACTATCCC ATTTTGCTTC TTTTCTGCGG TCTTCATTCA GGTGCTAAAC CCAATGAACA TCGCCTATCG TAAGCGCGAA CCTGACCGTG TGCTGGCCAC CCGGATGGCG ATTCGCACGC ATCGCATTAG CTATATTACG CTGATTGCCA TTATTCTCTT TTTCTCGTTC TCGTTTACCT TTTCGATTAG CCATGAAGAG GCGGTATCAG CGTTCGAGCA GAATATTTCC GCCCTTGCAC TGGCAGCTCA GGTAATCCCT GGCCATATCA TCCACATTAC CTCTACCATC CTCAATATTT TTGCCGTACT TACCGCGTTC TTTGGTATTT ATTTAGGTTT TCACGAAGCG CTTAAAGGTA TTGTACTGAA TGTATTGAGT CGTATTATGG ATGTCAAAAA CGTCAACCCA CTGTTACTGA CATCTGGAAT CTGTGTCTTT ATCGTGGTTA CTCTGGTTAT TTGGGTTTCG TTTCGCGTCT CAGTATTGGT CTTTTTCCAG TTAGGCAGTC CGCTTTATGG CATTGTCGCG TGTATTATTC CCTTTTTCCT GATTTATAAA GTAGCGCAAC TGGAAAAATT ACGCGGCCTG AAAACCTGGC TTATTCTGTT ATATGGAATA TTGTTGTGCC TGTCGCCGTT ATTAAAATTG ATTGAATAA
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Protein sequence | MQDDTLPLNN SNATTTPLST RLPFTKYDFG WVLLCIGMAI GAGTVLMPVQ IGLKGIWVFI TAFIIAYPAT YIVQDIYLKT LSESETCDDY TDIISHYLGK NWGVFLGVIY FLMIIHGVFI YSLSVVFDSA SYIKTFGLTE ADLSQSIIYK VAIFAVLVAI ASGGEKLLFK ISGPMVVVKV GIILIFGFAM IPHWNLDNIS AFPAASVFFR DVLLTIPFCF FSAVFIQVLN PMNIAYRKRE PDRVLATRMA IRTHRISYIT LIAIILFFSF SFTFSISHEE AVSAFEQNIS ALALAAQVIP GHIIHITSTI LNIFAVLTAF FGIYLGFHEA LKGIVLNVLS RIMDVKNVNP LLLTSGICVF IVVTLVIWVS FRVSVLVFFQ LGSPLYGIVA CIIPFFLIYK VAQLEKLRGL KTWLILLYGI LLCLSPLLKL IE
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