Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3885 |
Symbol | |
ID | 6486114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3763116 |
End bp | 3764603 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642739149 |
Product | hypothetical protein |
Protein accession | YP_002042860 |
Protein GI | 194444038 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGGCA CAAAAATTCG ACTCTTAGCG GGCAGTCTGT TGATGTTGGC CTCTGCCGGC TATGTGCAGG CAGATGCGCT CCAGCCCGAT CCGGCATGGC AACAGGGGAC GCTGGCTAAT GGGTTACAGT GGCAAGTGTT GGCTACGCCT CAGCGCCCCA GCGATCGTAT TGAAGTTCGT CTCCAGGTTA ATACCGGTTC GCTCACCGAA AGTACGCAAC AGAGCGGGTT CAGCCATGCG ATTCCCCGTA TCGCGCTGAC GCAAAGCGGT GGTCTGGATG CCGCACAGGC ACGTTCTTTA TGGCAGCAAG GGTTTGATCC TAAACGTCCC ATGCCGCCCG TTATTGTTTC TTATGATTCC ACGCTCTATA ACCTCAGTTT ACCCAATAAC CGTAACGATC TGCTGAAAGA AGCGCTGACC TATCTGGCTA ACGTCTCCGG TAAATTAACC ATTACGCCAG AGACGGTGAA TCATGCGTTA AGCAGCGAAG ATATGGTTGC GACGTGGCCA GCAGATACTA AAGAGGGCTG GTGGCGTTAT CGGCTGAAAG GGTCGGCGTT ATTGGGGCAC GATCCCGCGG AACCGTTAAA GCAGCCGGTA GACGCAGCCA AAATTCAGGC TTTCTATGAA AAATGGTACA CCCCGGATGC CATGACGCTG ATTGTTGTCG GCAACATTGA TGCGCGCTCC GTCGCCGAGC AGATCAATAA AACGTTCGGT ACGCTGAAAG GTAAACGCGA AACGCCCGCC CCGGTGCCGA CGCTTTCGCC GCTGCGGGCG GAATCAGTGA GCATTATGAC CGATGCGGTG CGCCAGGATC GTCTCTCCAT TATGTGGGAT ACGCCGTGGC AACCGATTCG CGAGTCGGCA GCGCTGTTGC GCTACTGGCA GGCGGATCTG GCGCGCGAAG CGCTGTTCTG GCATATCCAG CAAGAGCTTA CTAAAAATAA CGCGAAAGAT ATTGGTCTGG GGTTTGACTG CCGGGTTCTG TTCCTGCGCG CGCAGTGCGC CATCAACATT GAATCACCTA ATGATAAGCT CAATACCAAT TTGAGCCTGG TGGCGAATGA ACTGGCGAAA GTACGCGATA AAGGTTTGTC GGAAGAGGAG TTTACTGCGC TGGTGGCGCA GAAAAATCTC GAATTGCAAA AGCTGTTCGC GACCTACGCG CGTACCGATA CTGACATTTT GACTGGACAG CGTATGCGCT CGCTGCAGAA TCAAGTGGTG GATATCGCGC CGGAGCAGTA TCAGAAGCTG CGCCAGAATT TCCTCAACAG CCTGACCGTC GATATGCTCA ATCAGAATCT ACGTCAGCAG CTATCGCAGG AGATGGCATT AATTTTGCTG CAACCGCAAG GCGAGCCGGA ATTTAATATG AAGGCGTTAA AGGCGACGTG GGATGAAATC ATGGTCCCGA CAACTGCCGC CGCTGTTGAA GCAGATGAGG CGCATCCGGA AGTGACGGAG ACACCGGCGG CACAGTAA
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Protein sequence | MQGTKIRLLA GSLLMLASAG YVQADALQPD PAWQQGTLAN GLQWQVLATP QRPSDRIEVR LQVNTGSLTE STQQSGFSHA IPRIALTQSG GLDAAQARSL WQQGFDPKRP MPPVIVSYDS TLYNLSLPNN RNDLLKEALT YLANVSGKLT ITPETVNHAL SSEDMVATWP ADTKEGWWRY RLKGSALLGH DPAEPLKQPV DAAKIQAFYE KWYTPDAMTL IVVGNIDARS VAEQINKTFG TLKGKRETPA PVPTLSPLRA ESVSIMTDAV RQDRLSIMWD TPWQPIRESA ALLRYWQADL AREALFWHIQ QELTKNNAKD IGLGFDCRVL FLRAQCAINI ESPNDKLNTN LSLVANELAK VRDKGLSEEE FTALVAQKNL ELQKLFATYA RTDTDILTGQ RMRSLQNQVV DIAPEQYQKL RQNFLNSLTV DMLNQNLRQQ LSQEMALILL QPQGEPEFNM KALKATWDEI MVPTTAAAVE ADEAHPEVTE TPAAQ
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