Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3824 |
Symbol | |
ID | 6485552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3699081 |
End bp | 3699926 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642739089 |
Product | glycerol-3-phosphate transporter membrane protein |
Protein accession | YP_002042800 |
Protein GI | 194446126 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 103 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGAGA ATCGTCGCGG GCTGACAATA TTCAGCCATA CCATGCTGAT TCTGGGGATC GCGGTCATTT TGTTTCCGCT GTATGTCGCG TTTGTCGCGG CGACGCTGGA CGACCGCGCG GTGTTTGAGA CGCCGATGAC GCTGCTTCCC GGCACGCAGT TACTGGAGAA TATCAAAACT ATTTGGGTCA ACGGCGTCGG TGTTAATAGC GCGCCATTCT GGCTGATGAT GCTTAACAGT TTCATTATGG CGTTCAGCAT TACGGTAGGC AAAATCACGG TATCTATGCT TTCCGCATTC GCCATCGTCT GGTTTCGTTT TCCCCTGCGT AACCTGTTCT TCTGGATGAT TTTTATCACC CTGATGCTGC CGGTTGAAGT GCGTATCTTC CCGACGGTGG AAGTGATCGC CAACCTGAAA ATGCTCGACA GCTATGCTGG TCTGACGCTA CCGCTGATGG CGTCCGCTAC CGCCACTTTC CTGTTTCGTC AGTTCTTCAT GACGCTTCCG GATGAACTGG TGGAGGCGGC CCGTATTGAC GGCGCGTCGC CGATGCGCTT TTTCCGCGAC ATCGTGTTGC CGCTGTCAAA AACCAACCTG GCGGCGTTAT TCGTCATCAC CTTTATCTAC GGCTGGAACC AGTATCTGTG GCCGCTGTTG ATTATCACCG ACGTGAATCT TGGCACTGCC GTAGCGGGTA TCAAAGGGAT GATCGCCACC GGCGAAGGTA CCACGCAATG GAACCAGGTG ATGGCGGCAA TGCTGCTCAC CCTTATCCCT CCGGTCGTTA TCGTTTTAGC CATGCAACGG GCGTTTGTGC GTGGTTTAGT GGACAGTGAG AAATAA
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Protein sequence | MIENRRGLTI FSHTMLILGI AVILFPLYVA FVAATLDDRA VFETPMTLLP GTQLLENIKT IWVNGVGVNS APFWLMMLNS FIMAFSITVG KITVSMLSAF AIVWFRFPLR NLFFWMIFIT LMLPVEVRIF PTVEVIANLK MLDSYAGLTL PLMASATATF LFRQFFMTLP DELVEAARID GASPMRFFRD IVLPLSKTNL AALFVITFIY GWNQYLWPLL IITDVNLGTA VAGIKGMIAT GEGTTQWNQV MAAMLLTLIP PVVIVLAMQR AFVRGLVDSE K
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