| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3790 |
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| Symbol | |
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| ID | 6482535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3660960 |
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| End bp | 3661718 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642739057 |
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| Product | DNA-binding transcriptional repressor GlpR |
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| Protein accession | YP_002042768 |
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| Protein GI | 194446805 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 113 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAA CACAACGGCA TGACGCGATC ATTGAACTGG TAAAAAAACA GGGGTACGTC
AGTACGGAAG AGCTGGTGGA GCATTTTTCT GTCAGCCCGC AAACCATTCG TCGGGATCTT
AACGATCTGG CGGAACAGAA TATGATTTTG CGCCACCACG GCGGCGCGGC GTTGCCCTCC
AGCTCGGTGA ACACGCCGTG GCACGATCGT AAGGCGACGC AAACGGAAGA AAAAGAGCGC
ATCGCTCGCA AAGTCGCGGC CCAGATCCCC AATGGTTCAA CGCTGTTTAT TGATATCGGC
ACGACGCCGG AAGCCGTAGC GCACGCCCTG TTAGGGCACA GTAATTTGCG GATCGTGACC
AACAATTTGA ACGTAGCGAA CACGCTAATG GCGAAAGAGG ATTTTCGTAT TATCCTCGCC
GGCGGTGAAC TCCGTAGCCG CGACGGCGGC ATTATTGGCG AAGCGACGCA GGACTTTATC
GCCCAGTTCC GTCTCGATTT CGGCATTCTC GGTATTAGCG GTATTGATAG CGACGGCTCG
TTGCTGGAAT TTGACTACCA TGAGGTACGC ACCAAGCGCG CGATTATCGA AAATTCGCGC
CACGTGATGC TGGTGGTGGA TCACTCCAAA TTTGGTCGTA ATGCGATGGT AAACATGGGC
AGCATTAGTA TGGTCGATGC GGTCTACACC GATACTCTGC CGCCGCCGGG CGTGATGCAG
GTGTTGACGG AGAACCATAT CCAACTGGAG CTGTGTTAA
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| Protein sequence | MKQTQRHDAI IELVKKQGYV STEELVEHFS VSPQTIRRDL NDLAEQNMIL RHHGGAALPS
SSVNTPWHDR KATQTEEKER IARKVAAQIP NGSTLFIDIG TTPEAVAHAL LGHSNLRIVT
NNLNVANTLM AKEDFRIILA GGELRSRDGG IIGEATQDFI AQFRLDFGIL GISGIDSDGS
LLEFDYHEVR TKRAIIENSR HVMLVVDHSK FGRNAMVNMG SISMVDAVYT DTLPPPGVMQ
VLTENHIQLE LC
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