Gene SNSL254_A3785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3785 
SymbolgntY 
ID6485909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3650723 
End bp3651298 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content54% 
IMG OID642739052 
Productputative DNA uptake protein 
Protein accessionYP_002042763 
Protein GI194445195 
COG category[O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein
[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID[TIGR03341] IscR-regulated protein YhgI 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones109 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTA TTTCCGATGC TGCACAAGCG CACTTTGCCA AACTGCTGGC AAATCAGGAA 
GAAGGGACGC AAATCCGCGT ATTTGTCATT AATCCCGGCA CTCCTAACGC AGAGTGCGGC
GTTTCTTATT GTCCGCCCGA CGCCGTAGAA GCCACCGATA CTGCACTGAA ATTTGACCTG
TTGACCGCTT ATGTCGACGA GCTGAGCGCG CCCTATCTGG AAGACGCGGA AATTGATTTC
GTGACCGACC AGCTAGGTTC TCAACTCACA TTGAAAGCGC CAAACGCGAA GATGCGCAAA
GTGGCCGATG ACGCGCCGCT GATGGAGCGC GTGGAATATG CTCTGCAATC GCAGATTAAC
CCGCAGTTGG CGGGCCACGG CGGTCGCGTC TCGCTGATGG AAATTACCGA TGAAGGCTAT
GCAATTCTGC AGTTTGGCGG CGGTTGTAAC GGTTGCTCGA TGGTTGACGT CACGCTGAAA
GAAGGGATCG AGAAACAGTT GCTGAATGAA TTCCCGGAGC TGAAAGGGGT TCGCGATCTG
ACCGAACACC AGCGCGGCGA GCACTCCTAC TACTAA
 
Protein sequence
MIRISDAAQA HFAKLLANQE EGTQIRVFVI NPGTPNAECG VSYCPPDAVE ATDTALKFDL 
LTAYVDELSA PYLEDAEIDF VTDQLGSQLT LKAPNAKMRK VADDAPLMER VEYALQSQIN
PQLAGHGGRV SLMEITDEGY AILQFGGGCN GCSMVDVTLK EGIEKQLLNE FPELKGVRDL
TEHQRGEHSY Y