Gene SNSL254_A3763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3763 
Symbol 
ID6485168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3626495 
End bp3627034 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content59% 
IMG OID642739030 
ProductPilN family protein 
Protein accessionYP_002042741 
Protein GI194442845 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3166] Tfp pilus assembly protein PilN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.196896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCATT CTGTCAATTT GCTCCCCTGG CGGCGCCAAC ATTACGTAGC GCGTCTGCGG 
CTGTGGTGCG TGGTATGGGG CGCGTCCCTG CTGCTGATAG CAAGCCTCGC GACGATCGCC
CGGTTGGTTT TTTGGCAGGA GGGGAGGATT AATGAACTGC TACTGACGGC GGAAAACGGA
CGCACGACGG CGCTTGCGGC GAACATACCG CAGTTGCAGC AGCGTCAGCG ACAGCAACAG
GCGCGATTAC AACGTCAGGC GCAGCGTGAA CTGACGCAAG CCTGGAAATC TATCTTGACT
GACCTTGCCA ACCTGTTGCC AGAACAGGCA TGGCTGACAA GCCTCAATTA TCAGCAAGAG
ACGCTAGAGC TGGAAGGGCT GGCGAGAACG TTTGACGCCC TGCTCACGCT TGAGACATCG
CTTCGTCACT ATGTCAGTTT TCCGCTAAAC CGCACGGGCG CCACGCGGCA GGATGCGCAA
GGGCGCTGGC AGTTCCATTA TCAGTTAACG AGGAGCGCCG CCCGTGAACG CGCTCTTTGA
 
Protein sequence
MAHSVNLLPW RRQHYVARLR LWCVVWGASL LLIASLATIA RLVFWQEGRI NELLLTAENG 
RTTALAANIP QLQQRQRQQQ ARLQRQAQRE LTQAWKSILT DLANLLPEQA WLTSLNYQQE
TLELEGLART FDALLTLETS LRHYVSFPLN RTGATRQDAQ GRWQFHYQLT RSAARERAL